Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01112 ATGGAGAGCTTATTAGGTCTTCTTCGTATTCGGATCATTCGCGGCGTCAACCTCGCCGTTCGCGACGTTCGCAGCAGTGATCCTTACATCGTCGTTAAATTGAATAAACAGAAATTGAAGACCCGTGTGATCAAGAAGGATGTCAATCCTGAATGGAACGAGGACCTCACTCTTTCTGTTACCGACCCCGATGTTTCAGTCAAGCTCACGGTGTACGACCACGACACGTTTACGATGGACGACAAGATGGGAGATGCGGAGTTCGAGATAGGGCCATACATCGAAGCACTGAAGATGGATTTGGCAGAGCTACCAAGTGGAACCGTGCTGTCAAGGGTGCAGCCATGCAGGCAAAATTGCTTAGCCGAGGAGAGCGCCATAGTGTGGGAGGAAGGCAAGGTTATTCAAAACATTTGCCTGCGCTTGCGAAATGTTGAATGCGGCGAAGTTGAAATCCAGTTGCAGTGGATTGAGCTTCCTGGTGCCAAAGGTTTGTAA 498 49.4 MESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKLNKQKLKTRVIKKDVNPEWNEDLTLSVTDPDVSVKLTVYDHDTFTMDDKMGDAEFEIGPYIEALKMDLAELPSGTVLSRVQPCRQNCLAEESAIVWEEGKVIQNICLRLRNVECGEVEIQLQWIELPGAKGL 165
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 9578261 9579620 - Cp4.1LG09g11190.1 Cpe09g01112 475478
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01112 165 CDD C2_ArfGAP 5 148 - -
Cpe09g01112 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
Cpe09g01112 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 143 IPR035892 -
Cpe09g01112 165 Pfam C2 domain 6 92 IPR000008 -
Cpe09g01112 165 Gene3D C2 domain 4 163 IPR035892 -
Cpe09g01112 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Cpe09g01112 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Cpe09g01112 165 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00045 Cpe-Chr1:297361 Cpe09g01112 Cpe-Chr9:9578261 3.29E-67 dispersed
Cpe01g01844 Cpe-Chr1:15729256 Cpe09g01112 Cpe-Chr9:9578261 2.23E-72 dispersed
Cpe09g01112 Cpe-Chr9:9578261 Cpe10g00739 Cpe-Chr10:4223760 5.28E-43 dispersed
Cpe20g00154 Cpe-Chr20:873232 Cpe09g01112 Cpe-Chr9:9578261 3.41E-44 transposed
Cpe18g00677 Cpe-Chr18:6805030 Cpe09g01112 Cpe-Chr9:9578261 1.55E-93 wgd
Cpe02g01454 Cpe-Chr2:12546919 Cpe09g01112 Cpe-Chr9:9578261 2.33E-49 wgd
Cpe20g00153 Cpe-Chr20:872328 Cpe09g01112 Cpe-Chr9:9578261 5.41E-17 wgd
Cpe04g01368 Cpe-Chr4:11123228 Cpe09g01112 Cpe-Chr9:9578261 1.24E-88 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01112 - - cmo:103502345 295.049