Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01119 ATGATTGGCCACCGAGAAAATCGCGAAAGAGGGAGAACGGAAAATGCTGGAATCGAGTGGCGGAGAGCTGAATCAGTACCGTGTAACGCTACTCCTGGTTTTATTCGGATTAGGGCCTTGAATCCACTTGAATCTCTCAGGCAGACTGCGCTACCATGGATCGCACCAGTAAGGTTAGCTGGAGCTTCTTGCCCATCTTCCCTTTCCTGTTTGAAACCTGCTCGAGGCGAGAAGCACTCAGAATTTTTCACAGAGTATGGAGAAGGAAGCCGATACCATATTCAGGAAGTGATTGGGAAAGGAAGCTACGGAATTGTTGGTTCTGCAATTGACACCCAAACTGGTGAAAGGGTTGCTATCAAGAAAATTCATGATGTTTTTGAGCATGTATCTGATGCCATACGCATCCTAAGAGAAATTAAGCTCCTCCGGATGCTCCATCATCCGAACATTGTAGAGATAAAACATATCATGCTTCCTCCCTCACAGCGAGAATTTAAAGATATTTATCTTGTTTTTGAGTTGATGAAGACTGATCTTCACCACGTAATTAAGGAAAATAATGATCTTTCTGCCAAGCAGCATAAATTTTTCTTGTACCAGCTTCTTAGTGGCCTAAAATATATACATGCCGCAAATGTTCTTCATCGAGATTTGAAGCCAAAAAACATACTTGCTAATACTGACTGCAGACTGAAGATATGTGATTTTGGACTAGCTCGAGTATCTTTTAGTGACGCGCCATCTACTATTTTCTGGACAGATTATGTTGCAACTCGCTGGTATCGGGCTCCCGAACTCTGTGGATCCTTTTTCTCGAGATATACCCCTGCTATAGATATTTGGAGTATCGGATGCATATTTGCAGAAATGCTTTCGGGAAAACCTTTGTTTCCTGGAAAAAATGTGGCTCACCAGTTAGATTTAATTACCGATCTGTTTGGGACTCCTGATGCTGAATCCGTAGCGAAGATTCGGAATGAAAAGGCAAGAAGGTACCTGGCAAACATGCGTAAGAAAACACCAGTTCCATTCTCACGAAAGTTTCCTAATGCCGACCCATTGGCACTTCGTTTACTGGAACGCCTCCTGGCATTTGATCCCAAACGTCGTCTAACTGCTGCAGAGGCACTTACGGATTCTTACTTCAATGATATAACGAAAGCAGAAATTGAACCTTCTATTCAACCAATTTCAAAGCTTGAGTTTGACTTTGAGAGAAAGAGATTAACAAAAGATGATGTTAGAGAGTTAATTTATGCAGAGATTTTAGAGTATCATCCCGAAATGCGTCAGGAGGGCCTACACGATGGAGGTCAATCTACCTTTATCTATCCAAGTGGTGTTGATCGATTTAAACTTCAGTTTGCGCATCTGGAAGAGAACTTCAGCAAAGGTCAAAGAAGTGCTCCACTTCAAAGGCAGAACGTTTCCTTACCTCGGGAGCGGGTTACTCCACCTGAGCACAAGAACGCTGAGCATAACAATGAATTTGGAAGGGGGGAAGAGAAGAGTGCCCACCTCTTCAAAAGTGCTAGCATTAGTGCATCGAGGTGTGTAGGGGTAATACCGAAGGAGAAGTCTGAGGAGGAAGAAACGAGTTCTGAGGTGAAAGGTGAAGCAGTTGATGAATCGACTCAAAAGATTGCAGTCCTTCAGAGTTGA 1665 43.18 MIGHRENRERGRTENAGIEWRRAESVPCNATPGFIRIRALNPLESLRQTALPWIAPVRLAGASCPSSLSCLKPARGEKHSEFFTEYGEGSRYHIQEVIGKGSYGIVGSAIDTQTGERVAIKKIHDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKTDLHHVIKENNDLSAKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANTDCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLSGKPLFPGKNVAHQLDLITDLFGTPDAESVAKIRNEKARRYLANMRKKTPVPFSRKFPNADPLALRLLERLLAFDPKRRLTAAEALTDSYFNDITKAEIEPSIQPISKLEFDFERKRLTKDDVRELIYAEILEYHPEMRQEGLHDGGQSTFIYPSGVDRFKLQFAHLEENFSKGQRSAPLQRQNVSLPRERVTPPEHKNAEHNNEFGRGEEKSAHLFKSASISASRCVGVIPKEKSEEEETSSEVKGEAVDESTQKIAVLQS 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9629950 9635641 + Cp4.1LG09g11140.1 Cpe09g01119 475485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01119 554 Gene3D Transferase(Phosphotransferase) domain 1 178 406 - -
Cpe09g01119 554 SUPERFAMILY Protein kinase-like (PK-like) 89 388 IPR011009 -
Cpe09g01119 554 ProSitePatterns Protein kinases ATP-binding region signature. 98 122 IPR017441 GO:0005524
Cpe09g01119 554 MobiDBLite consensus disorder prediction 465 506 - -
Cpe09g01119 554 ProSiteProfiles Protein kinase domain profile. 92 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01119 554 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 57 505 - -
Cpe09g01119 554 Gene3D Phosphorylase Kinase; domain 1 108 429 - -
Cpe09g01119 554 MobiDBLite consensus disorder prediction 466 480 - -
Cpe09g01119 554 MobiDBLite consensus disorder prediction 483 506 - -
Cpe09g01119 554 Pfam Protein kinase domain 92 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01119 554 MobiDBLite consensus disorder prediction 520 554 - -
Cpe09g01119 554 MobiDBLite consensus disorder prediction 523 543 - -
Cpe09g01119 554 SMART serkin_6 92 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g01119 554 ProSitePatterns MAP kinase signature. 127 230 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe09g01119 554 CDD STKc_TDY_MAPK 91 428 - -
Cpe09g01119 554 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 57 505 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g01119 Cpe20g00144 CCT
Cpe04g01376 Cpe09g01119 CCT
Cpe09g01119 Cpe20g00144 ECH
Cpe04g01376 Cpe09g01119 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01119 Cpe-Chr9:9629950 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe04g01090 Cpe-Chr4:9489949 Cpe09g01119 Cpe-Chr9:9629950 1.39E-07 transposed
Cpe18g00681 Cpe-Chr18:6822933 Cpe09g01119 Cpe-Chr9:9629950 0 wgd
Cpe20g00144 Cpe-Chr20:812233 Cpe09g01119 Cpe-Chr9:9629950 0 wgd
Cpe04g01376 Cpe-Chr4:11169248 Cpe09g01119 Cpe-Chr9:9629950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62632 PF00069 Pkinase 8.20E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01119 - - bhj:120082540 800.816