Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01127 ATGGCCAAATCCCCAACTGCTCGACAGATTATGGCGACCCTTTCGTTATCCTGTTTCGATCTCTCTTCCATCGGCCGGAGCGACAATCGCCGCCGTTACCTCCACCGATTCAGGCGACAAGGGAAATCAGAAGCCTCGTGGGCCTTAAGCCGGCGGAATATGGTCGCGGTGAAGTCCGTCACAGCGTTTTACGGTGGCAATAAGGAGAAGGGTTCGATCTGTACTGCCGACGAGCTTCATTACGTCTCTGTTCCCAACTCTGATTGGAAGCTCGCTCTCTGGCGGTACAACCCTTCTCTTCAGGCGGCATCCAGAAATCATCCGCTTCTGCTGTTGTCAGGGGTTGGGAGCAACGCTCTTGGATATGACCTTTCCCCACAGTCCTCATTTGCTCGCTACATGTCGAACCAAGGATACGACACTTGGATTCTTGAGGTTCGAGGATCGGGACTGAGCACTCACAGAGTAGAAAGGAAGGATACTACTGGTCAGATAAGGTCAGAAACTCCGGACAAACAGCCATTAGCTAAGATTGGAACATATTCCAGCTCTGAGGGTTCCAGCATTTCTTCAAAACATGGACAGGAATCTACCATTGCTACTCAACTTGGGAACTGGAATAAGAATCTTATCAATATCATTGAAGGAGCTCAACAACTGGGTCCATTGAAGCCTTTTAATTTACAAGGTGTTACCTCTGCATTAGAGGACTTCCAGGAACAACTTGATGTGTATGAGAAGTATGACTGGGACTTCGACCACTACTTGGAAGAAGATGTACCCGCTGCGGTGAGATGGAGTACATAA 807 48.95 MAKSPTARQIMATLSLSCFDLSSIGRSDNRRRYLHRFRRQGKSEASWALSRRNMVAVKSVTAFYGGNKEKGSICTADELHYVSVPNSDWKLALWRYNPSLQAASRNHPLLLLSGVGSNALGYDLSPQSSFARYMSNQGYDTWILEVRGSGLSTHRVERKDTTGQIRSETPDKQPLAKIGTYSSSEGSSISSKHGQESTIATQLGNWNKNLINIIEGAQQLGPLKPFNLQGVTSALEDFQEQLDVYEKYDWDFDHYLEEDVPAAVRWST 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9683239 9691468 + Cp4.1LG09g11270.1 Cpe09g01127 475493

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01127 268 Gene3D alpha/beta hydrolase 78 267 IPR029058 -
Cpe09g01127 268 PANTHER LYSOSOMAL ACID LIPASE-RELATED 57 264 - -
Cpe09g01127 268 SUPERFAMILY alpha/beta-Hydrolases 83 156 IPR029058 -
Cpe09g01127 268 MobiDBLite consensus disorder prediction 154 194 - -
Cpe09g01127 268 MobiDBLite consensus disorder prediction 176 194 - -
Cpe09g01127 268 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 57 264 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01127 - - - cmos:111457026 501.516
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01801 Cpe-Chr1:14976747 Cpe09g01127 Cpe-Chr9:9683239 9.84E-16 dispersed
Cpe09g01127 Cpe-Chr9:9683239 Cpe13g00390 Cpe-Chr13:4255029 3.24E-15 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g277 . Blo16g00128 . . . Bpe13g00365 . . . Cmo18g00043 . . . . . . . . . . . . . . . . . . . . . Cone2ag0742 . . . Lsi02g00213 Csa01g00695 Chy12g01416 Cme12g01852 . . . . . . . . Sed08g2743 . . . Cma18g00053 . Car18g00047 Cpe09g01127 . Bhi08g01263 Tan05g2228 Cmetu09g1201 Lac10g0266 Hepe07g2371 . . Cla04g01069 Cam04g1113 Cec01g1627 Cco01g1673 Clacu04g1139 Cmu04g1121 Cre01g1422 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007326 0 1 2 0 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9 1 0 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe09g01127 Cpe_Chr09 FPKM 312.19162 363.714752 50.278542 46.130146 22.2589 18.146029 23.801739 84.65696 90.527504 93.266785