Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g01132 ATGGCGGCCAAGAGATTGTTCTGCGAAACAGAGTCCATTTTAACACCTCCTCTGGAGAAGAAACGCCCACGCCAAACCTTCGCGTCGATAATTGGGGAAGTCGTTATGGGGAATTCCTTGAGGCATCTTACCAAAGCATTGGAGCCATTGCTGAGAAGAGTGGTCTGTGAGGAAGTTGATCGGAGTTTAATGCGGTATTCGAGGTCGTTAACGAGGGCTTCGTCGTTGAGGATTCAAGCTCTGGAGCCTTCCAGTTATCAATTGTATTTTGTGAATAACGTACCGTCGAAGATTTTCACCGGAAGTAAGATCACGGATGTGGAAAATCAGGCGCTGCGGATTGCCGTCGAGGACGGCGGCGGAGATCTGCCGTCGCTTATTTCTTCGCCAGTTAAAGTAGAAATTGTGGCGCTGAATGGCGATTTTCCTGGCGATAAACAGGACTGGACGGCGGATGAATTTAATGCTAACATTGTGAAAGAGCGGACTGGAAGGAGGCCGCTGCTTCATGGCGACATGAATGTAACTCTCCGGCACGGCGCTGCAACCATCGGAGATATTGAATTCACGGACAACTCGTGCTGGATCAGGAGCAGGAAGTTCCGGCTTGGTGCCCGAATTGTTCCCGGGTCGGATCGTAATAAAAGCCCCCGGATCCGTGAAGCTATAAGCGAACCGTTTGTGGTCAATGATCACCGCGGTGAATCTTCAAAAACAGAGAGGACGCCAGCATCAACACCTGGAGGACCTCGATCTAAGGAAGAGAAAATCGTTGTTACGGTGCGGTTAAGGCCTCTGAATAAAAAGGAGCAGCAAGCGAAAGATCAAATGGCATGGGAGTGCATTGATGATACTACGATTGTGTACAAACCTCAGCCTCAGGAACGTCAAACTCAACCGTCCTCCTTTGCATTTGATAAAGTTTTCGGTCCCGCTTCTTTGACTGAGGCAGTATATGAGGAAGGAGTAAAGAATGTTGCCTTATCTTCTCTGATGGGCATCAATGCCACCATATTCGCTTATGGGCAAACTAGCAGTGGGAAAACATTTACAATGAGGGGGATAACCGAGAAGGCTGTTAATGATATCTACAGACATATTAGCAATACACCCGAGCGAGATTTTACAATAAGAATTTCAGGACTCGAAATATACAACGAGAATGTTAGGGATCTATTGAATACCGAATCAGGTCGTAATCTAAAGCTTCTTGACGATCCTGAGAAAGGTACAATGGTTGAGAAATTAGTAGAGGAAACGGCAAATGATGATCGACATTTGAGACAACTGATTAGCATCTGCGAGGCACAAAGACAAGTTGGTGAAACTGCCTTAAATGATCATAGCTCCCGGTCACACCAGATAATAAGACTGACAATTCAAAGTACTCTACGAGAGACTTCAGATTGCGTGAGGACTTTTGTGGCAAGCTTGAACTTTGTTGATCTAGCCGGAAGTGAGAGAGCTTCACAGACACATGCTGATGGTGCTAGGCTAAGAGAAGGCTGCCATATTAATCTTAGTTTGATGACACTCACAACTGTGATCAGAAAGCTAAGTCAAGGAAAGAGAAGTGGCCATATACCTTACAGAGACTCAAAGCTCACCCGCATATTGCAGCATTCACTTGGTGGAAATGCTCGAACCGCGATTATATGCACTCTGAGTCCAGCCCTGACTCATGTTGAACAATCGCGGAACACTTTGTACTTTGCCACCCGGGCGAAGGAAGTGACTAATAACGCCCAAGTTAATATGGTTGTATCGGACAAGCAATTGGTTAAACACTTACAGAAGGAAGTTGCTAGGCTAGAAGCGGAACTGCGCACTCCTGATCCGAAAAGGGAAAAAGATTTAAAAATCCAGCAGATGGAAATGGAGATTGAAGAATTAAAACGACAAAGAGACCTTGCACAATCTCAGGTTGATGAGCTCCGCAGAAAACTTGAGGTGGATCAGCAGGGTTCTAAACCAATTGAATCTGCCCGTCCTCCAGTGAAGAAGTGCTTGTCCTTTACTGGTACATTGCCTCAGAAACTCGATGGCGGCAAGGACCTTGGCCGTGGTATGATATTAAGGCAGTCGATGATGAGACAATCGTCTACCGCTCCTTTCACACTCATGCATGAAATTCGCAAGTTGGAACATCTCCAGGAGCAGCTTGGGAAGGAAGCCAATAAAGCCCTCGAAGTACTGCAAAAGGAGGTGGCTTGTCACAGACTGGGGAACCAAGATGCAGCAGAAACTATTGCCAAGCTGCAGGCTGAAATTGGAGAAATGAGATCAGTCCGTTCAGAATCAAAAGAGGTCGAGGTTGGGAGCGTTATTGCTACTAACCAGAGTGTAGGTGCTAATCTTAAGGAAGAGATAACACGGCTTCATTCTCAAGGTAGCACCATTGCAGATCTAGAGGAGCAACTTGAAAATGTTCAGAAGTCCATTGACAAGTTGGTAATGTCTCTACCGAGCAATTATCAGCAGTTAATGAGCAGTGAATCAACCCCCAAACAAAAAAGTTATACCAAAAAGAAGACGTTGCTTCCTTTGGCCTTAAGTAATGTCGCCAACCGGCAAAACTTTTTAAGATCACCTTGCTCACCTTCAACAACTTCGCAGCAAGTACTGGAGTCCGATATCGAAAATAGAGCTCCTGAGAATGATGATGTCTTCTCACCTGAGACTCTACTCGAGTCCGAGAAAGAGACTCCAACAAAGTCAAGTGAAGAAGGTGGAGATATCTCCTCAAAGGAGAGCACTCCATGTTATCGAAGATCAAGTTCTGTGAACATGAAGAAGATGCAAAAGATGTTCCAAAATGCTGCAGAAGAAAACGTAAGAAGCATTAGAGCATACGTGACAGAATTGAAAGAACGTGTGGCTAAATTGCAGTACCAGAAACAGCTACTTGTTTGTCAGGTCCTTGAGCTGGAAGCAAACGAAGCAGCTGGGAACAAATTAGATTGTGATGAGAACACATTTGAACCGGAGGATGAGCAAGTTCCATGGCATATAACTTTCAGGGAGCAAAGACAGCAGATCATTGAGTTATGGGATGCTTGCTACGTCTCCATTATTCACAGATCTCAATTCTACTTGCTATTCAAGGGCGACCCGGCTGATCAGATCTACCTGGAAGTTGAGATGAGGCGCTTAACATGGCTGGAGGATCACTTAGCAGAAGGTGGCAATGCTAGTCCAGCTCACGCTGGAGACGAGCCATCAATCTCTCGCTCCTCAAGTATGAGGGCGTTGAGACGTGAAAGAGAGTTTCTTGCAAAGAGATTAACCTCACGTTTGACAGCAGAAGAAAGAGATGCATTGTACATGAAATGGGAAGTACCACTTGAAGGGAAACAGAGGAAAATCCAGTTTGTAAACAAGCTTTGGACAAATCCTCACGACCCTAAGCATATTCAACAGAGTGCAGAGATTGTGGCAAAGCTTGTAGGGTTCTGTGAAGGAGGCAACGTGTCCAGAGAGATGTTTGAACTCAATTTTGCTGCTCCATCCGACAAAAGACCATGGATCATGGGATGGAACCAAATTTCAAACCTACTTAATTTGTGA 3567 45.44 MAAKRLFCETESILTPPLEKKRPRQTFASIIGEVVMGNSLRHLTKALEPLLRRVVCEEVDRSLMRYSRSLTRASSLRIQALEPSSYQLYFVNNVPSKIFTGSKITDVENQALRIAVEDGGGDLPSLISSPVKVEIVALNGDFPGDKQDWTADEFNANIVKERTGRRPLLHGDMNVTLRHGAATIGDIEFTDNSCWIRSRKFRLGARIVPGSDRNKSPRIREAISEPFVVNDHRGESSKTERTPASTPGGPRSKEEKIVVTVRLRPLNKKEQQAKDQMAWECIDDTTIVYKPQPQERQTQPSSFAFDKVFGPASLTEAVYEEGVKNVALSSLMGINATIFAYGQTSSGKTFTMRGITEKAVNDIYRHISNTPERDFTIRISGLEIYNENVRDLLNTESGRNLKLLDDPEKGTMVEKLVEETANDDRHLRQLISICEAQRQVGETALNDHSSRSHQIIRLTIQSTLRETSDCVRTFVASLNFVDLAGSERASQTHADGARLREGCHINLSLMTLTTVIRKLSQGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALTHVEQSRNTLYFATRAKEVTNNAQVNMVVSDKQLVKHLQKEVARLEAELRTPDPKREKDLKIQQMEMEIEELKRQRDLAQSQVDELRRKLEVDQQGSKPIESARPPVKKCLSFTGTLPQKLDGGKDLGRGMILRQSMMRQSSTAPFTLMHEIRKLEHLQEQLGKEANKALEVLQKEVACHRLGNQDAAETIAKLQAEIGEMRSVRSESKEVEVGSVIATNQSVGANLKEEITRLHSQGSTIADLEEQLENVQKSIDKLVMSLPSNYQQLMSSESTPKQKSYTKKKTLLPLALSNVANRQNFLRSPCSPSTTSQQVLESDIENRAPENDDVFSPETLLESEKETPTKSSEEGGDISSKESTPCYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEAAGNKLDCDENTFEPEDEQVPWHITFREQRQQIIELWDACYVSIIHRSQFYLLFKGDPADQIYLEVEMRRLTWLEDHLAEGGNASPAHAGDEPSISRSSSMRALRREREFLAKRLTSRLTAEERDALYMKWEVPLEGKQRKIQFVNKLWTNPHDPKHIQQSAEIVAKLVGFCEGGNVSREMFELNFAAPSDKRPWIMGWNQISNLLNL 1188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9704624 9712799 - Cp4.1LG09g11380.1 Cpe09g01132 475498

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g01132 1188 SMART kinesin_4 254 586 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 612 IPR027417 -
Cpe09g01132 1188 Coils Coil 614 648 - -
Cpe09g01132 1188 PANTHER CENTROMERE PROTEIN E 243 1187 - -
Cpe09g01132 1188 Gene3D Kinesin motor domain 249 609 IPR036961 -
Cpe09g01132 1188 MobiDBLite consensus disorder prediction 860 879 - -
Cpe09g01132 1188 Pfam Kinesin motor domain 262 578 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 Pfam Calmodulin binding protein-like N-terminal domain 86 232 IPR046831 -
Cpe09g01132 1188 MobiDBLite consensus disorder prediction 229 254 - -
Cpe09g01132 1188 MobiDBLite consensus disorder prediction 860 926 - -
Cpe09g01132 1188 Pfam Domain of unknown function (DUF3490) 1006 1168 IPR021881 -
Cpe09g01132 1188 Coils Coil 743 763 - -
Cpe09g01132 1188 PRINTS Kinesin heavy chain signature 528 549 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 PRINTS Kinesin heavy chain signature 477 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 PRINTS Kinesin heavy chain signature 443 460 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 PRINTS Kinesin heavy chain signature 333 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 ProSitePatterns Kinesin motor domain signature. 476 487 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cpe09g01132 1188 MobiDBLite consensus disorder prediction 880 912 - -
Cpe09g01132 1188 PANTHER KINESIN-LIKE PROTEIN KIN-7A 243 1187 - -
Cpe09g01132 1188 ProSiteProfiles Kinesin motor domain profile. 256 578 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe09g01132 1188 Coils Coil 587 607 - -
Cpe09g01132 1188 Coils Coil 793 820 - -
Cpe09g01132 1188 CDD KISc_CENP_E 256 578 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g01132 K11498 CENPE; centromeric protein E - csv:101215425 1735.7
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe09g01132 Cpe20g00132 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01132 Cpe-Chr9:9704624 Cpe15g00563 Cpe-Chr15:6454530 0 dispersed
Cpe01g01703 Cpe-Chr1:11287006 Cpe09g01132 Cpe-Chr9:9704624 0 transposed
Cpe20g00132 Cpe-Chr20:743439 Cpe09g01132 Cpe-Chr9:9704624 0 transposed
Cpe20g00130 Cpe-Chr20:723081 Cpe09g01132 Cpe-Chr9:9704624 2.46E-113 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g285 Blo04g00833 Blo16g00131 . . . Bpe13g00360 Bma06g00050 . Cmo13g01049 Cmo18g00040 . . . . . Cpe20g00132 . . . . . . . . . . . . . . . . . . . Lsi02g00207 Csa01g00689 Chy12g01421 Cme12g01857 . . Bda11g01773 . . Bpe15g00531 Bma03g00900 . . . . Cma13g01010 Cma18g00049 Car13g00845 Car18g00043 Cpe09g01132 . Bhi08g01257 . . . . . . Cla04g01075 Cam04g1119 Cec01g1632 Cco01g1678 Clacu04g1145 Cmu04g1126 Cre01g1427 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001397 1 1 3 3 2 2 3 2 2 1 2 2 3 2 2 3 2 2 3 2 2 2 2 3 4 2 1 10 2 2 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe09g01132 Cpe_Chr09 FPKM 0.0 0.0 5.082955 0.0 0.0 0.0 4.119077 4.06489 0.0 0.0