Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe09g01137 | ATGGCTGCTGAGTTCACTCCAAACTTTCAGAGCTTAAAGCCATCACCTTTTCCTCTAATGGAAGCCGATTCCAACATTCCTGTTTTGTTCAATGACGGTTTCTTTTCCGACCACGCTGCTCCTCCCAGATTCCCGGAAAACCGTCGAGAAAATCTCCCCAAAATTTTCTCTCCAGCCAATCAGCTCGCTTCCCCTGTTTTTGAGCGCAAGAAAAGAAAGCTTGAAACTGACGCTTCTGCAAGCAGTTCCGGCAATTCATTACCTCAGCGTTCTGAAACTGCGATCAACACTAAAAACAGCTCTGGAAGAGGAAAGCAGCCGGAAAAAGGCAGGGGAGTGGTTCATGTTAGAGCCAAAAGAGGTCAAGCAACAGACAGCCACAGTGTAGCCGAAAGGATAAGAAGAGGCAAAATCAATGAAAGATTGAGATGCTTGCAAGACATTGTACCAGGATGTTACAAGACAATGGGAATGGCAGTGATGTTGGATGAGATAATTAATTACGTGCAGTCTTTGCAGAATCAAGTTGAGTTTCTTTCTATGAAACTCACAGCTGCAAGCTCCTATTATGACTTCAACTCAGACGAAGCATATGAACAAGCTTAG | 606 | 44.39 | MAAEFTPNFQSLKPSPFPLMEADSNIPVLFNDGFFSDHAAPPRFPENRRENLPKIFSPANQLASPVFERKKRKLETDASASSSGNSLPQRSETAINTKNSSGRGKQPEKGRGVVHVRAKRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSDEAYEQA | 201 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 9735254 | 9736369 | + | Cp4.1LG09g11280.1 | Cpe09g01137 | 475503 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe09g01137 | 201 | Gene3D | - | 119 | 190 | IPR036638 | GO:0046983 | |
| Cpe09g01137 | 201 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 62 | 196 | IPR024097 | GO:0006355 | |
| Cpe09g01137 | 201 | MobiDBLite | consensus disorder prediction | 104 | 129 | - | - | |
| Cpe09g01137 | 201 | MobiDBLite | consensus disorder prediction | 71 | 129 | - | - | |
| Cpe09g01137 | 201 | Pfam | Helix-loop-helix DNA-binding domain | 126 | 173 | IPR011598 | GO:0046983 | |
| Cpe09g01137 | 201 | PANTHER | TRANSCRIPTION FACTOR BEE 1 | 62 | 196 | - | - | |
| Cpe09g01137 | 201 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 120 | 190 | IPR036638 | GO:0046983 | |
| Cpe09g01137 | 201 | MobiDBLite | consensus disorder prediction | 78 | 103 | - | - | |
| Cpe09g01137 | 201 | CDD | bHLH_AtBPE_like | 112 | 195 | - | - | |
| Cpe09g01137 | 201 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 122 | 172 | IPR011598 | GO:0046983 | |
| Cpe09g01137 | 201 | SMART | finulus | 128 | 178 | IPR011598 | GO:0046983 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe09g01137 | Cpe20g00122 | CCT | |
| Cpe04g01400 | Cpe09g01137 | CCT | |
| Cpe04g01400 | Cpe09g01137 | ECH | |
| Cpe09g01137 | Cpe20g00122 | ECH | |
| Cpe09g01137 | Cpe18g00762 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe09g01137 | Cpe-Chr9:9735254 | Cpe12g01104 | Cpe-Chr12:9140287 | 3.75E-36 | dispersed | |
| Cpe18g00762 | Cpe-Chr18:7310238 | Cpe09g01137 | Cpe-Chr9:9735254 | 1.87E-61 | wgd | |
| Cpe02g01437 | Cpe-Chr2:12438218 | Cpe09g01137 | Cpe-Chr9:9735254 | 6.58E-37 | wgd | |
| Cpe20g00122 | Cpe-Chr20:682246 | Cpe09g01137 | Cpe-Chr9:9735254 | 1.16E-94 | wgd | |
| Cpe04g01400 | Cpe-Chr4:11301856 | Cpe09g01137 | Cpe-Chr9:9735254 | 5.13E-60 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 50050 | PF00010 | HLH | 3.30E-05 | No_clan | Cpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe09g01137 | - | - | cmax:111489917 | 383.259 |