Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00071 | ATGGCTTTCAGGTCGAGCAGTCATACCAAAACGCGGGTGGGGAGATATGAGCTGGGGCGAACCCTTGGAGAGGGCAGCTTCGCGAAGGTTAAGTTCGCTCGGAATTGCGAGACAGGGGAGAACGTCGCCATTAAAATCCTCAACAAAGAGGACATTCTCAAGCACAAGATGATCGGGCAGATTAAACGTGAAATATCAACGATGAAACTCATTAGACATCCAAATGTCATTCGAATGTATGAGGTGATGGCTAGCAAAACCAAGATATATATTGTTTTGGAATTTGTAACTGGTGGAGAACTATTCAACAAAATTGCATGTAATGGAAGATTCAAAGAAGATGAAGCAAGAAAATATTTTCAGCAGCTTATAAATGCTGTGGATTATTGCCACAGCAGAGGCGTTTGTCATCGAGACCTAAAGCCAGAGAATTTATTATTGGATGCCAGTGGCGTTCTAAAAGTTTCAGATTTTGGATTGAGTGCTCTACCTCAACAAGTTCGAGACGATGGATTACTTCACACAACATGTGGAACACCCAATTATGTTGCTCCAGAGGTTATCAACAATAAAGGCTACTGTGGTGCAAAGGCGGACCTATGGTCATGTGGGGTTATCCTTTTTGTCCTCATGGCAGGCTATTTGCCATTTGAAGAAGCCAGTCTCGTGACATTGTATAAAAAGATATTCAAGGCCGACTTCAAATGTCCTCCATGGTTCTCCTCTAGTGCCAAGAAATTAATCAAGAGAATCCTCGATCCGAACCCGTTAACTAGAATTACAATTGTTGAGGTTCTTGAGAATGATTGGTTTAAGAAAGGATACAAGCCACCCACTTTCGAAAACGACGAAATCGTTCTTGATGACATTGACGACATCTTTAATGAATCAGGGGTCACTCATAACCTTGTAGTCGAGAAGAGAGAAGAAGGGCTCGCATCCCCTGCATCACCTGTCACCATGAATGCATTCGAGCTCATCTCGAAATCTCAGGGTCTCAACCTTGCCACTCTTTTTGAGAAGCAAATGGGGCTATCTAAACGTGACAAAAGTTTCACATCCCATTGTCCAGCAGATGAAATCCTTTCCAAGATAAAAAAGACAGCAGTTCCTATGGGTTTTGATGTGAAGATCAATAACTTCAAGATGAAGCTCCAAGGGGAAAAAACTGGACGCAAAGGTCATTTATCAGTTGCAACAGAGATTTTTCAGGTCGCTCCATCGTTACATATGGTAGAGCTCCGCAAAGCTGGAGGGGATACTTTAGAATTTCACAAGTTCTATAATAACCTCTCAACTGGACTGAAAGATGTTGTATGGCGAACCGGAGACGAGACGGAGCAGGAAAGTAACGGTGTAGCAAATGCTTGA | 1371 | 42.74 | MAFRSSSHTKTRVGRYELGRTLGEGSFAKVKFARNCETGENVAIKILNKEDILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFNKIACNGRFKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDASGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYCGAKADLWSCGVILFVLMAGYLPFEEASLVTLYKKIFKADFKCPPWFSSSAKKLIKRILDPNPLTRITIVEVLENDWFKKGYKPPTFENDEIVLDDIDDIFNESGVTHNLVVEKREEGLASPASPVTMNAFELISKSQGLNLATLFEKQMGLSKRDKSFTSHCPADEILSKIKKTAVPMGFDVKINNFKMKLQGEKTGRKGHLSVATEIFQVAPSLHMVELRKAGGDTLEFHKFYNNLSTGLKDVVWRTGDETEQESNGVANA | 456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 526181 | 530043 | - | Cp4.1LG10g06160.1 | Cpe10g00071 | 475608 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00071 | 456 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 280 | IPR011009 | - | |
Cpe10g00071 | 456 | ProSiteProfiles | NAF domain profile. | 316 | 340 | IPR018451 | GO:0007165 | |
Cpe10g00071 | 456 | Gene3D | Kinase associated domain 1, KA1 | 316 | 441 | - | - | |
Cpe10g00071 | 456 | Pfam | NAF domain | 318 | 377 | IPR004041 | GO:0007165 | |
Cpe10g00071 | 456 | CDD | STKc_SnRK3 | 15 | 270 | - | - | |
Cpe10g00071 | 456 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 9 | 446 | - | - | |
Cpe10g00071 | 456 | CDD | CIPK_C | 322 | 437 | - | - | |
Cpe10g00071 | 456 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 45 | IPR017441 | GO:0005524 | |
Cpe10g00071 | 456 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 278 | - | - | |
Cpe10g00071 | 456 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe10g00071 | 456 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 95 | - | - | |
Cpe10g00071 | 456 | SMART | serkin_6 | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00071 | 456 | Pfam | Protein kinase domain | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00071 | 456 | ProSiteProfiles | Protein kinase domain profile. | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00071 | 456 | PANTHER | SERINE/THREONINE KINASE | 9 | 446 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00071 | Cpe20g00539 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00542 | Cpe-Chr5:3233700 | Cpe10g00071 | Cpe-Chr10:526181 | 8.25E-177 | dispersed | |
Cpe06g00481 | Cpe-Chr6:2833608 | Cpe10g00071 | Cpe-Chr10:526181 | 9.03E-53 | dispersed | |
Cpe10g00071 | Cpe-Chr10:526181 | Cpe18g00496 | Cpe-Chr18:5756549 | 2.85E-177 | dispersed | |
Cpe17g00308 | Cpe-Chr17:2085688 | Cpe10g00071 | Cpe-Chr10:526181 | 4.99E-86 | dispersed | |
Cpe10g00071 | Cpe-Chr10:526181 | Cpe20g00539 | Cpe-Chr20:3136138 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62635 | PF00069 | Pkinase | 3.00E-74 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00071 | - | - | csv:101214052 | 811.986 |