Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00102 ATGGCTGCTTCCACAATGGCTCTTTCTTCTCCATCACTGGCTGGTAAGGCCGTGAAGCTCTCCCCCAACACCCCTGACATTCAGGGCAATGCAAGAGTCAGCATGAGGAAGACCGCCAGCAAGTCAGTTTCCTCTGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTCACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTCGGAGCTTTGGGCTGTGTGTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAGTTCGGCGAGGCTGTTTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGCCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACCCAGGTCGTGTTGATGGGCGCCGTCGAGGGCTACCGTATTGCCGGAGGCCCACTCGGGGAGGTCGTCGACCCCATCTACCCAGGTGGAAGCTTCGACCCGTTGGGTCTTGCTGACGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTAAAGAATGGAAGGCTCGCCATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATTGTCACCGGAAAGGGTCCTTTGGAAAACCTGGCTGACCACCTTGCCGACCCAGTCAACAACAATGCATGGGCCTACGCCACAAACTTTGTCCCTGGAAAGTGA 798 58.15 MAASTMALSSPSLAGKAVKLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 680220 681017 + Cp4.1LG10g05840.1 Cpe10g00102 475639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00102 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cpe10g00102 265 MobiDBLite consensus disorder prediction 23 38 - -
Cpe10g00102 265 MobiDBLite consensus disorder prediction 1 38 - -
Cpe10g00102 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cpe10g00102 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Cpe10g00102 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Cpe10g00102 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00823 Cpe-Chr3:5135966 Cpe10g00102 Cpe-Chr10:680220 1.23E-151 dispersed
Cpe10g00102 Cpe-Chr10:680220 Cpe14g00702 Cpe-Chr14:4610792 5.38E-118 dispersed
Cpe10g00102 Cpe-Chr10:680220 Cpe16g00726 Cpe-Chr16:7382116 0 wgd
Cpe10g00102 Cpe-Chr10:680220 Cpe19g01123 Cpe-Chr19:7560916 0 wgd
Cpe10g00102 Cpe-Chr10:680220 Cpe20g00512 Cpe-Chr20:2980161 1.41E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00102 K08912 - csv:101221671 527.324