Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00103 ATGTCAGATGAAATGTTTAAAGATCTATTTTTGTCGAGCCCTTTTGGATACGGTGGGTTGGGTGATTCAGAAACAGGCTTGGATGAGTACGAGTCTCTAGCCAGAGCTTTTGAGCTGTCCTCGGATTACTCGAATGAAATTTCGGGGACTCCCATGAATTCCTCCGCTTCCTTCTCCTCCTCTGATGCTGGAGCTGACGAGGATGATTCCCTCAAAGACAAGGATAAGCAGATCAAAGACATGGATGACGGCGGAGAGAGCTCCAAGACCGCGGCTAAATCAAAGAAGAAAGTAGAGAAGAAAGAAAGAGAGCCAAGAGTTGCTTTCATGACCAAGAGCGAGGTCGATCATCTTGAAGATGGGTATCGATGGAGAAAATATGGACAGAAGGCTGTCAAGAACAGCGCTTATCCTAGGAGCTATTACAGATGCACGACGCAGAAATGCGGAGTGAAGAAACGGGTGGAGAGATCGTATGAAGATCCATCCATAGTAATTACGACGTACGAAGGGCAACACAATCACCCAATTCCCGCGACGTTAAGGGGGAACCTGTCGGCAGTGAGCGGCGCGTTTCCGCCGTCCATGTTGGCACCAATGCCGGTGGTCGGTGGCGTGAGGTATCTTCCACAGCTGATGAACAACACTTCCGTCAACAACAACCAGCCCATCGGAGGTGGTGACACCGTTTATTCACAAAGCAGCAGCTTCAATTATCCTTATAACGGACGGCAACAAGACTACGGACTTCTGCAGGACATTTTTCCGACGGCGCCGCCGTTCTTGAACCGACAACCATGA 801 49.44 MSDEMFKDLFLSSPFGYGGLGDSETGLDEYESLARAFELSSDYSNEISGTPMNSSASFSSSDAGADEDDSLKDKDKQIKDMDDGGESSKTAAKSKKKVEKKEREPRVAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSYEDPSIVITTYEGQHNHPIPATLRGNLSAVSGAFPPSMLAPMPVVGGVRYLPQLMNNTSVNNNQPIGGGDTVYSQSSSFNYPYNGRQQDYGLLQDIFPTAPPFLNRQP 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 689343 691269 - Cp4.1LG10g05720.1 Cpe10g00103 475640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00103 266 SUPERFAMILY WRKY DNA-binding domain 110 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe10g00103 266 MobiDBLite consensus disorder prediction 44 109 - -
Cpe10g00103 266 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 258 IPR044810 GO:0003700
Cpe10g00103 266 PANTHER WRKY TRANSCRIPTION FACTOR 81 44 258 - -
Cpe10g00103 266 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00103 266 Pfam WRKY DNA -binding domain 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00103 266 Gene3D WRKY domain 102 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe10g00103 266 MobiDBLite consensus disorder prediction 65 109 - -
Cpe10g00103 266 MobiDBLite consensus disorder prediction 44 64 - -
Cpe10g00103 266 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00849 Cpe-Chr4:7845052 Cpe10g00103 Cpe-Chr10:689343 2.18E-50 dispersed
Cpe10g00103 Cpe-Chr10:689343 Cpe15g00881 Cpe-Chr15:8508582 3.68E-58 dispersed
Cpe17g00078 Cpe-Chr17:448267 Cpe10g00103 Cpe-Chr10:689343 4.71E-41 dispersed
Cpe10g00103 Cpe-Chr10:689343 Cpe16g00728 Cpe-Chr16:7390912 9.35E-45 wgd
Cpe10g00103 Cpe-Chr10:689343 Cpe19g01120 Cpe-Chr19:7539284 3.37E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50067 PF03106 WRKY 1.50E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00103 - - cmo:103484390 340.502