Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00104 ATGGAGAAAGAGCCTCTTCTTCCGTATATGAGCCCAAGGGGGAAGCCGCTTCCTCCACCTCCTCAATTATTATGTCCACTCCCTGAAAACGATGAAATTACTCTCCCTATGACACCCACGGAGTTCAAAGACCGCCTGATCTTCGGTCCTTCATCGTCTCCGCAAGACACTTCTCCCATATTCGACGCCTTGACGCTCTCCCTTTCCTCCTCAAGACCCTCTGCTTCATCTTCTCTTCAGGACCCATCTACACCTTTGGCCCCAAAATCCCAATCGCCGTCTCAACAGGCATGGCTTGTGGATTCCAATTACTCATGGCACAAAAGCAACCTCCACCGCTCCAAAACCGCACCTGCGATGGCCGTCATCAACGATGTGAACCATTCGCAAGAGCCCAAACCACAATTTGGTAAGCAATCTATTATCCGCCAAGCTGTTGTTCTTCTAATTCTTTACTTATCATTGGGCGTGCTTATCTATTGGATTAATCGTGATAAGTTTTCGGCTCACGAGACTCACCCTGTGGTCGATGCATTGTACTTTTGCATAGTAACTATGTGCACTATTGGGTATGGAGATATCACGCCCAATAGTGCTGCGACGAAGCTGTTCTCCGTATTGTTTGTGTTGGTGGGATTCGGATTTATTGATATATTACTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGGAATGTAAAGAGAGGGGTGCAGCGTGAATCTGGGAAATCCTATATTATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCTCTGGCCTTGGGCGTTGTGATTCTTTGTATAGGACTTGGCATGGGTGTTATGCATTTTGTTGAAAATCTGGGATGGTTGGATTCATTTTATCTTTCAGTTATGTCTGTCACAACAGTTGGATATGGTGATCAGGCATTCAAGTCGATGACTGGTCGTATTTTTGCTTCGATTTGGTTGCTTGTATCGACCCTTGCTGTCGCTCGGGCGTTTCTTTATTTGGCAGAGGCAAGGGTAGATAAGCGGCATAGGATGATGGCAAAGTGGATACTTGGTCAGGATATGACTGTCTCTGAGTTTCTTGCTGCTGATACTGACAACAATGGCTGTGTGAGGTATGTTTTAACATTATTCTTTCAAACTAAGTTTAGAGAAGTAGCTTAG 1182 44.84 MEKEPLLPYMSPRGKPLPPPPQLLCPLPENDEITLPMTPTEFKDRLIFGPSSSPQDTSPIFDALTLSLSSSRPSASSSLQDPSTPLAPKSQSPSQQAWLVDSNYSWHKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLILYLSLGVLIYWINRDKFSAHETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRESGKSYIIDVKKGRMRIRMKVALALGVVILCIGLGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADTDNNGCVRYVLTLFFQTKFREVA 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 697807 698988 - Cp4.1LG10g05830.1 Cpe10g00104 475641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00104 393 SUPERFAMILY Voltage-gated potassium channels 256 360 - -
Cpe10g00104 393 Pfam Ion channel 148 227 IPR013099 -
Cpe10g00104 393 Pfam Ion channel 272 341 IPR013099 -
Cpe10g00104 393 PRINTS Two pore domain K+ channel signature 184 212 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe10g00104 393 PRINTS Two pore domain K+ channel signature 304 313 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe10g00104 393 MobiDBLite consensus disorder prediction 72 94 - -
Cpe10g00104 393 MobiDBLite consensus disorder prediction 11 26 - -
Cpe10g00104 393 Gene3D - 236 361 - -
Cpe10g00104 393 PANTHER TWO-PORE POTASSIUM CHANNEL 3 91 378 - -
Cpe10g00104 393 MobiDBLite consensus disorder prediction 1 33 - -
Cpe10g00104 393 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 91 378 IPR003280 GO:0005267|GO:0016020|GO:0071805
Cpe10g00104 393 SUPERFAMILY Voltage-gated potassium channels 142 234 - -
Cpe10g00104 393 Gene3D - 138 235 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00104 Cpe19g01119 CCT
Cpe10g00104 Cpe19g01119 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00819 Cpe-Chr2:5237600 Cpe10g00104 Cpe-Chr10:697807 2.67E-49 dispersed
Cpe09g00642 Cpe-Chr9:4849942 Cpe10g00104 Cpe-Chr10:697807 2.10E-47 dispersed
Cpe10g00104 Cpe-Chr10:697807 Cpe19g01119 Cpe-Chr19:7532894 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00104 K05389 - csv:101220017 658.292