Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00123 ATGAAGAGTCCGGTGAGGTTTAAGTTGGGGAAACAGTCGTCCCTGGCGCCGGATGGGCATCTCGAAGATTTGGAGGAGCTGGTCAAGCAGCACCAAACTGAGGAGGGGATAGATTCGAGGGTGAGGTTGATGTATTTGGCCAATGAAGGTGATTTGGAAGGGATTAATGAACTGTTGGATTCGGGAGTCGATGTCAATTTCCATGATATCGATAACCGGACGGCTCTGCATATTGCTGCTTGCCAGGGATTCGCCGACGTCGTCGCTTTGTTGCTCGAACGTGGCGCTGAAGTCGACTCCAAAGATCGCTGGGGGAGCACGCCTCTTAGGGATGCCGTGCATTACAAGAACCACGATGTGATCAAACTTCTGGAGAAGCATGGTGCAAAGCCTCCGGTGGCTCCCATGCTCGTGAAGAATGCCCGTGAAGTGCCAGATTATGAAATTGATCCTAAGGAGCTTGATTTTACTAACAGTGTGAACATTACCAAGGGAACATTTCGCAAAGCATCTTGGCGTGGAACTGAGGTTGCTGTGAAAGAGCTTGGAGAAGATCTATTCACTGATGAGGATAAAGTGAGGGCTTTCAGAGACGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTTCAGTTTCTAGGTGCTGTTACTCAAAGTTGGCCGATGATGATAGTTACAGAATATTTGCCAAAGGGAGATCTTGCAGCATTATTGGGCAGAAAAGGAACACTAAAAACTATGACCGTTGTGAGACTTGCCCTTCATATTGCAAGGGGGATGAACTATTTGCATGAGAACAAGCCAGCACCAATTATCCATCGTGATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACTTGAAAGTAGCAGACTTTGGAGTTAGCAAGTTATTGACGGTTAAAGAAGATAAACCTTTGACCTGTTCAGAGACTTCACGGAGATATGAAGCTCCGGAGGTTTTCAAAAATGAAGAATATGATACAAAGGTTGACGTATTTTCGTTTGCTTTGATTTTACAAGAGATGATTGAAGGCTGTCCTCCATTTCCCGACAAGCGAGATAGTGAAGTTCCTAAATTGTATGCAGCAGGTGAACGTCCACCATTTAAAGCACCACTTAAACGTTATGCAAATGGACTAAAAGAGCTAATTGAAGAATGCTGGAATGAGAAGCCAACTAAAAGACCTACTTTTAGGCAGATAATAACCCAGCTGGAATTCATTTACAATAGATTCGGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATTCTTCCAGAATATTGAGGCGATGTTGAAGAAAGATCGTTCCCGTCAAAACAGTTTGAATCTATCAACACATTCTTCTGCCAGCAGTATATGA 1377 44.52 MKSPVRFKLGKQSSLAPDGHLEDLEELVKQHQTEEGIDSRVRLMYLANEGDLEGINELLDSGVDVNFHDIDNRTALHIAACQGFADVVALLLERGAEVDSKDRWGSTPLRDAVHYKNHDVIKLLEKHGAKPPVAPMLVKNAREVPDYEIDPKELDFTNSVNITKGTFRKASWRGTEVAVKELGEDLFTDEDKVRAFRDELALLQKIRHPNVVQFLGAVTQSWPMMIVTEYLPKGDLAALLGRKGTLKTMTVVRLALHIARGMNYLHENKPAPIIHRDLEPSNILRDDSGHLKVADFGVSKLLTVKEDKPLTCSETSRRYEAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFPDKRDSEVPKLYAAGERPPFKAPLKRYANGLKELIEECWNEKPTKRPTFRQIITQLEFIYNRFGHKRRWKVRPLKFFQNIEAMLKKDRSRQNSLNLSTHSSASSI 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 793322 799314 - Cp4.1LG10g05610.1 Cpe10g00123 475660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00123 458 SUPERFAMILY Ankyrin repeat 19 132 IPR036770 -
Cpe10g00123 458 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 8 439 - -
Cpe10g00123 458 Pfam Protein tyrosine and serine/threonine kinase 161 409 IPR001245 GO:0004672|GO:0006468
Cpe10g00123 458 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Cpe10g00123 458 Gene3D - 13 144 IPR036770 -
Cpe10g00123 458 SMART ANK_2a 71 100 IPR002110 GO:0005515
Cpe10g00123 458 SMART ANK_2a 38 67 IPR002110 GO:0005515
Cpe10g00123 458 SMART ANK_2a 104 133 IPR002110 GO:0005515
Cpe10g00123 458 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 439 - -
Cpe10g00123 458 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Cpe10g00123 458 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Cpe10g00123 458 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Cpe10g00123 458 CDD STKc_MAP3K-like 162 409 - -
Cpe10g00123 458 ProSiteProfiles Protein kinase domain profile. 121 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00123 458 PIRSF ILK 2 432 - -
Cpe10g00123 458 SUPERFAMILY Protein kinase-like (PK-like) 165 413 IPR011009 -
Cpe10g00123 458 Gene3D Transferase(Phosphotransferase) domain 1 232 456 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00785 Cpe10g00123 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01543 Cpe-Chr5:10606822 Cpe10g00123 Cpe-Chr10:793322 0 dispersed
Cpe09g00199 Cpe-Chr9:1144514 Cpe10g00123 Cpe-Chr10:793322 5.08E-106 dispersed
Cpe10g00123 Cpe-Chr10:793322 Cpe15g00260 Cpe-Chr15:2500904 3.43E-111 dispersed
Cpe10g00123 Cpe-Chr10:793322 Cpe16g00735 Cpe-Chr16:7431807 0 wgd
Cpe10g00123 Cpe-Chr10:793322 Cpe09g00785 Cpe-Chr9:7275391 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62636 PF07714 PK_Tyr_Ser-Thr 6.00E-54 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00123 - - csv:101215728 832.402