Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00131 ATGGGTCGTGAGAAGAAGCGACTTCCACGCGTAATGACTGTTACGGGGGTAATATCAGAGCTTGATGATGAGCAGGCAAATAGTGTGACTTCTGAGGGACCTTCGTCAGTTGTGCAAGACCGTATAATTATTGTAGCCAATCAGCTTCCTATTAAAGCTAAGCGTAGACCGGACGATATCGGCTGGAGTTTTAGTTGGGATGAAGACTCTTTGCTGTGGCAGCTCAAGGATGGTTTACCTGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCGGGTGGATGTTGATTCATCCGAACAAGATGATGTCTCCCAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTTTGCCTCAGGCAATTTTATCAAAATTTTATCATGGTTTTTGTAAGCAGCAACTGTGGCCACTATTCCATTACATGCTTCCGTACTCCGCAACTCATGGTGGTCGGTTTGATCGGTCTTTGTGGGAGGCATATGTTGCAGCAAATAAAATTTTTTCTCAAAGGGTGATTGAGGTCATAAACCCAGATGATGACTTTGTATGGATTCATGATTACCATTTAATGGTGCTGCCTTCCTTCTTGAGGCGAAGGTTTACAAGATTGAGGATGGGTTTTTTTCTTCACAGTCCATTTCCTTCCTCAGAAATATATAGAACTTTACCAGTGAGGGAGGAGATTCTTAAGGCACTTTTGAATGCTGACCTTATTGGTTTTCACACTTTCGACTATGCTCGACATTTCTTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCAAAGAGGGGTTATATTGGGTTGGAATATTTTGGAAGGACTGTGGGGATAAAGATCATGCCTGTTGGAATTCACATGGGCCAGATGGAGTCAGTGTTGAGACTTGCTGATAAAGACTGGAGGGTACAGGAGCTCAAGCGGCAGTTTGAAGGAAAAGTTGTGTTACTTGGAGTTGATGATATGGACATTTTCAAAGGGGTCAATCTGAAGTTGTTGGCAATGGAACAAATGCTAAGGCAACATCCAAAGTGGCAGGGAAGAGCCGTTTTCATACAGATTGCAAACCCAGCTAGAGGAAAGGGGAAAGATCTTGAGGAAATACGAGAGGAAATACAGGAATGCTGTAAGAGAATTAATGAAAGTTTTGGACAGACAAATTATGAGCCTATTGTGTTCATTGATCGGCCTGTTTCTCTCACTGAAAGAGCTGCATATTATACGGTTGCCGAATGTGTTGTAGTCACGGCAGTGAGGGATGGGATGAATCTAACTCCTTATGAGTACGTTGTCTGCAGGCAGGGAACCTCTGGATCAGATTGTAGTTCAGAATCAAATGGGCCACAGAAGAGCATGCTAGTGATATCAGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCTATACGGGTTAACCCATGGAACATTGAAGCTACTGCTGAAGCATTGAATGAGGCAATATCAATGGCTGATGCTGAAAAGCAATTGCGCCATGAAAAGCATTATAAATATGTGAGTACACATGACGTGGCGTACTGGTCAAAGAGTTTTTTCCAAGATATGGAAAGAACTTGTAAAGATCACTTCAGACGACGGTGCTGGGGAATTGGGTTGGGCTTTGGCTTCAGAGTTGTAGCACTTGATCCCAACTTTAGAAAGTTGTCTATTGATGCCATTGTAGCTGCGTATTCGAGGTCCAAAAGGAGGGCCATACTTTTGGATTATGATGGCACTGTCATGCCACAAACATCAATTGATAAGGCCCCAAGTCGTCAAGTTATTTCAATCATAGATTCACTTTGCGATGATGTTAGGAATACCGTTTTTGTTGTCAGTGGAAGAGGGCGTGAAAGTTTGGGCAACTGGTGGTCTGCTGATAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATCGCAGAGCCAGTCATGAAATTATATACAGAAGCAACTGACGGCTCTTCTATTGAAACCAAGGAAAGTGCCTTGGTGTGGCACCACCGGGATGCAGACCCTGATTTTGGTTGCAGTCAGGCCAAGGAACTGTTGGATCACCTTGAAAGTGTGCTGGCAAATGAACCAGTCGCTGTAAAAAGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGGAGTCAGTAAAGGTTTGGTGGCAGAAAAGATCTTCACGTCAATGACGGACGCAGGCAGACGAGCTGATTTTGTGTTATGCATTGGTGATGATAGATCTGATGAAGACATGTTTGAGATCATTGGTCATGCAGTATCAAGTGGCGTCCTCTCTTCCAATACATTAGTTTTTGCCTGCACAGTCGGACAGAAACCAAGCAAGGCCAAGTATTACTTGGATGACACAACTGAGGTCATAAACATGCTTGAAGCCCTTGCAGAAGTTTCAGACATTTCTTCTCCTCCAGAATCCCCTTGA 2442 43.61 MGREKKRLPRVMTVTGVISELDDEQANSVTSEGPSSVVQDRIIIVANQLPIKAKRRPDDIGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDSSEQDDVSQLLLERFKCVPAFLPQAILSKFYHGFCKQQLWPLFHYMLPYSATHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPSFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADKDWRVQELKRQFEGKVVLLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQGRAVFIQIANPARGKGKDLEEIREEIQECCKRINESFGQTNYEPIVFIDRPVSLTERAAYYTVAECVVVTAVRDGMNLTPYEYVVCRQGTSGSDCSSESNGPQKSMLVISEFMGCSPSLSGAIRVNPWNIEATAEALNEAISMADAEKQLRHEKHYKYVSTHDVAYWSKSFFQDMERTCKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVAAYSRSKRRAILLDYDGTVMPQTSIDKAPSRQVISIIDSLCDDVRNTVFVVSGRGRESLGNWWSADKDWENCGQGSDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHRDADPDFGCSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFTSMTDAGRRADFVLCIGDDRSDEDMFEIIGHAVSSGVLSSNTLVFACTVGQKPSKAKYYLDDTTEVINMLEALAEVSDISSPPESP 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 838756 842271 - Cp4.1LG10g05590.1 Cpe10g00131 475668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00131 813 CDD HAD_TPP 572 795 - -
Cpe10g00131 813 TIGRFAM T6PP: trehalose-phosphatase 568 801 IPR003337 GO:0003824|GO:0005992
Cpe10g00131 813 SUPERFAMILY HAD-like 571 801 IPR036412 -
Cpe10g00131 813 CDD GT20_TPS 41 524 IPR001830 GO:0003824|GO:0005992
Cpe10g00131 813 Pfam Glycosyltransferase family 20 41 524 IPR001830 GO:0003824|GO:0005992
Cpe10g00131 813 Pfam Trehalose-phosphatase 574 625 IPR003337 GO:0003824|GO:0005992
Cpe10g00131 813 Pfam Trehalose-phosphatase 627 790 IPR003337 GO:0003824|GO:0005992
Cpe10g00131 813 Gene3D Glycogen Phosphorylase B; 35 294 - -
Cpe10g00131 813 Gene3D - 681 808 IPR023214 -
Cpe10g00131 813 Gene3D - 570 644 IPR023214 -
Cpe10g00131 813 Gene3D Glycogen Phosphorylase B; 295 508 - -
Cpe10g00131 813 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 805 - -
Cpe10g00131 813 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 805 IPR001830 GO:0003824|GO:0005992
Cpe10g00131 813 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 40 528 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00131 Cpe19g01083 CCT
Cpe10g00131 Cpe19g01083 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00131 Cpe-Chr10:838756 Cpe14g00973 Cpe-Chr14:8231859 0 dispersed
Cpe10g00131 Cpe-Chr10:838756 Cpe15g00820 Cpe-Chr15:8155545 0 wgd
Cpe10g00131 Cpe-Chr10:838756 Cpe19g01083 Cpe-Chr19:7365597 0 wgd
Cpe10g00131 Cpe-Chr10:838756 Cpe04g00803 Cpe-Chr4:7586345 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00131 K16055 - csv:101213082 1571.99