Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00138 ATGGCCGACGTTAAGGAAATGTCAGCCCCTGTCATTGATGGAAATGACCCAGTTACTGGTCACATAATATCAACGACTATTGGAGGCAAGAATGGGGAGCCCAAACAGACCATAAGTTACATGGCAGAACGTGTTGTTGGAACTGGATCATTTGGTATTGTTTTCAAGGCCAAATGCTTGGAAACGGGTGAAAATGTGGCTATAAAGAAGGTTTTGCAGGACAGAAGATATAAGAACCGTGAACTCCAGTTAATGCGTGTGATGGATCATCCAAATGTCATTTCCTTAAAGCATTGTTTCTTTTCCACTACTACGAAAGACGAGCTTTTTCTCAACTTGGTTATGGAATATGTTCCCGAAACCATGTTTCGGGTATTGAAGCATTACAGTAATGCAAATCAAAGGATGCCAATCATCTATGTCAAATTATACATGTACCAGGTTTTTAGGGGCCTGGCCTATATCCACACGGTTCCTGGAGTTTGCCACCGAGATTTGAAGCCTCAAAATATTTTGGTGGATCCTCTTACTCACCAAGTTAAAATATGCGATTTTGGAAGCGCTAAAATGCTTATGAAAGGTGAAGCCAACGTTTCATACATATGTTCGCGCTTCTATAGGGCACCAGAACTCATCTTTGGAGCTACAGAGTACACAACCTCCATAGATATTTGGTCTGCTGGTTGTGTCCTTGCTGAGCTGCTTTTGGGACAGCCTTTGTTTCCTGGAGAAAATGCAGTGGACCAACTCGTAGAGATCATAAAGGTTCTTGGTACACCAACTCGTGAAGAAATTCGATGTATGAATCCAAGTTATACAGACTATAGGTTTCCACAGATAAAAGCTCACCCATGGCACAAGGTTTTCCACAAACGGATGCCTCCCGAGGCAATAGATCTGGCTTCTCGATTGCTTCAGTATTCGCCCAGTCTTCGCTGCACCGCACTGGAAGCTTGCACGCATCCTTTCTTTGCCGAACTTCGAGAACCCAATGCCCGCCTCCCAAATGGTCGACCATTTCCACCCCTCTTTAACTTCAAACAAGAGAAATCCAACGGCTCATTATTGCCTTACTCATCTGCAGTTCACAGCGAAGATGGAGAAATTACGGTCTTTCACTATCAGCTTTTTTCACTTGGGGAACTCTCGCTTTCGTTTCCCCCCCGCTTGGTAATGGAAGTTGTCAAAGTGGTTATATTGCTGTTCATCCTCATCTGGGTCGTCTCTGCCTCAGACAGTCATTTGTCTCCGAAAGGAGTAAACTATGAAGTGGCGGCGTTGATGTCGGTGAAGAGTTGGATACGGGACGAGCGGAGAGTGATGCAAGGATGGGACATCAATTCGGTTGATCCATGCACCTGGAATATGGTTGCTTGCTCTGTTGAGGGCTTTGTGATTTCTCTCGAGATGTCAAATATGGGCTTATCTGGAACGCTTTCCCCTAGCATTGGGAACCTGAGTTATCTTCGGACAATGTTCTTGCAAAATAATGAATTATCTGGTCCAATCCCAGATGATATAGGAGAACTTTCAGAGCTTCAGACTCTTGACCTTTCTAACAACCAGTTTGTAGGCGGCATTCCAAGTTCTTTGGGGTCTCTCACTCATTTAAATTACTTGAAGCTCAGCAGTAACAAGTTAAGTGGACCAATTCCGGAATCTGTTGCAAATATTTCAGGCCTTTCCTTCTTTGTTGCAGGGAATAGCTTCCTTTGTGCATCTTCATCATCTAAAGTTTGTGGAGTAGTTCCAAAGCCAGTTAATGAAACTGGTTCGCCTCAGAAAGATAATGGCCGACATCACTTGATCCTTTCCATAGCTCTAATTGTCAGTTTCACATTTGTGGTTTCTGTTGTGTTACTTGTTGGCTGGGTGCATTGTTATAGATCTCATCTTGTCTTCACGTCCTACGTGCAGCAAGATTATGAATTTGATATAGGTCATCTGAAAAGGTTTACATTCCGTGAACTACAAAAGGCAACATGTAATTTTAGTCCCCAAAACATCCTGGGACAGGGTGGTTTTGGAGTAGTTTATAAAGGTTATCTTCCAAATGGAACATATGTTGCTGTCAAGAGACTGAGAGATCCAAATTATACTGGAGAAGTGCAGTTTCAAACAGAAGTTGAAATGATTGGCTTAGCCGTGCACCGCAACCTCTTGCGTTTGTATGGCTTTTGTATGACGCCAGATGAGAGATTGCTCGTTTATCCATATATGCCAAATGGAAGCGTTGCTGACCGCCTGAGAGATGCAGGCCAGGAGAAGCCAACATTGAATTGGAACAGAAGATTGTGTATTGCCCTTGGTGCAGCTCGTGGACTTGTATACTTGCATGAGCAGTGTAACCCAAAAATTATTCACCGGGATGTGAAAGCTGCAAATATTCTTCTAGATGAAAGCTTTGAAGCGGTGGTGGGGGATTTTGGTCTGGCAAAGATGTTAGATAGGAGAGATTCACATGTTACTACTGCTGTTAGGGGCACTGTGGGACATATTGCCCCGGAATATCTTTCAACTGGACAATCTTCAGAAAAGACTGATGTTTTTGGATTTGGCATATTGGTTCTGGAACTCTTAACAGGCCAAAAAGCACTAGATGCTGGCAATGGCCAAGTTAGAACATTACATGAGGAGAAGAGGCTAGATGTGCTGGTGGACAGGGATCTAAAAGGATGTTATGATGCAATGGAGCTGGAAAAAGCTGTAGAGTTGGCTCTACAGTGTACTCAGTCACATCCACAACTCAGACCGAAGATGTCCGAGATCTTGAAGGTTGTAGAAGGTCTGGTTGGACAGTCGAGTCAAATGGAGGAATCACCAGGTGGAGCAGGAAGTGTTTATGAGAATAGAGCTCACAGTTTCTCCACAAAGTACTGTGATATTCATGAAGAGTCTTCATTTGTCATCGAAGCCATGGAGCTTTCAGGACCCCGTTGA 2940 43.71 MADVKEMSAPVIDGNDPVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFKAKCLETGENVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTTKDELFLNLVMEYVPETMFRVLKHYSNANQRMPIIYVKLYMYQVFRGLAYIHTVPGVCHRDLKPQNILVDPLTHQVKICDFGSAKMLMKGEANVSYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPSYTDYRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACTHPFFAELREPNARLPNGRPFPPLFNFKQEKSNGSLLPYSSAVHSEDGEITVFHYQLFSLGELSLSFPPRLVMEVVKVVILLFILIWVVSASDSHLSPKGVNYEVAALMSVKSWIRDERRVMQGWDINSVDPCTWNMVACSVEGFVISLEMSNMGLSGTLSPSIGNLSYLRTMFLQNNELSGPIPDDIGELSELQTLDLSNNQFVGGIPSSLGSLTHLNYLKLSSNKLSGPIPESVANISGLSFFVAGNSFLCASSSSKVCGVVPKPVNETGSPQKDNGRHHLILSIALIVSFTFVVSVVLLVGWVHCYRSHLVFTSYVQQDYEFDIGHLKRFTFRELQKATCNFSPQNILGQGGFGVVYKGYLPNGTYVAVKRLRDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRDAGQEKPTLNWNRRLCIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKMLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILVLELLTGQKALDAGNGQVRTLHEEKRLDVLVDRDLKGCYDAMELEKAVELALQCTQSHPQLRPKMSEILKVVEGLVGQSSQMEESPGGAGSVYENRAHSFSTKYCDIHEESSFVIEAMELSGPR 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 873422 882921 - Cp4.1LG10g05580.1 Cpe10g00138 475675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00138 979 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Cpe10g00138 979 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Cpe10g00138 979 Gene3D Ribonuclease Inhibitor 420 585 IPR032675 -
Cpe10g00138 979 Pfam Protein kinase domain 667 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00138 979 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00138 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Cpe10g00138 979 ProSiteProfiles Protein kinase domain profile. 664 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00138 979 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 564 979 - -
Cpe10g00138 979 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 39 250 - -
Cpe10g00138 979 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 398 564 - -
Cpe10g00138 979 CDD STKc_GSK3 35 327 IPR039192 -
Cpe10g00138 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Cpe10g00138 979 SUPERFAMILY Protein kinase-like (PK-like) 39 350 IPR011009 -
Cpe10g00138 979 Gene3D Transferase(Phosphotransferase) domain 1 740 938 - -
Cpe10g00138 979 Gene3D Transferase(Phosphotransferase) domain 1 120 362 - -
Cpe10g00138 979 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Cpe10g00138 979 Pfam Leucine rich repeat N-terminal domain 421 460 IPR013210 -
Cpe10g00138 979 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00138 979 SUPERFAMILY Protein kinase-like (PK-like) 646 926 IPR011009 -
Cpe10g00138 979 Gene3D Phosphorylase Kinase; domain 1 634 739 - -
Cpe10g00138 979 SUPERFAMILY L domain-like 422 571 - -
Cpe10g00138 979 SMART serkin_6 664 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00138 979 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00138 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 564 979 - -
Cpe10g00138 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 39 250 - -
Cpe10g00138 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 398 564 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00138 Cpe-Chr10:873422 Cpe16g00770 Cpe-Chr16:7646642 5.69E-10 dispersed
Cpe10g00138 Cpe-Chr10:873422 Cpe15g00827 Cpe-Chr15:8199278 4.96E-10 wgd
Cpe10g00138 Cpe-Chr10:873422 Cpe19g01075 Cpe-Chr19:7333938 0 wgd
Cpe10g00138 Cpe-Chr10:873422 Cpe04g00796 Cpe-Chr4:7548686 3.18E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62637 PF00069 Pkinase 9.90E-65 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00138 - - mnt:21389269 1502.65