Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00166 ATGGGAAAACATTCGAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTATTTAAGGATAAGGCAAAGAACCGGGTCGATGATCTGCAAAATATATTTGTAGATTTGCAGTATGCAAGGAAGGAGAGCCGCACGGTTGATGTGTCAGTTCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAATCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTTTTGGGTCATTTTCATCGGACATTTGTCGATTGTTACAACTTTGTGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCTGAACCTAATGAACAAAATTTGCAGGTTGGAGATGCTATGGCACATCAGGAGGTTCTTAGTATCACTATTAACCTACTTCAGGGATTTAATGTGAATCGTATACACCAAGAACCAAGCTTCCCTCTAGTTGATCAATGCAAGAACTCCCCATCAGGAGTTCATGGTATGGTTATGAATAACATGGAAGGACCTACACATTCGGAGTGTCATCCGTTTGATTTACAGCAAGGCATTGAGCACAACTTTTACACTATCCTTAATGCTAGAGGTTTGTGTGGAGAGGGTGCAATTCCTCATGTTTCTGGCTACTGTCCCAGCATTTGCCCTCCACCTGCTGCTTTTTTAGGCCCAAAATGTGCGCTTTGGGATTGCCCACGACCTGCCCAAGGGATGGATTGGTGTGGGGACTACTGTAGCAGTTTTCATACTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCGGTGTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGGGCAAAGGCACAAGGGAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATACTGGAGGGTGAGATGATTAGGGAGTGGCTATTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGAAAGCAGAGGTCTTTGCCTGATTACAGTGGACGTGGTTGGCATGAATCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCTTATTATATGGATCCTCAGCCACTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTACGACGCCTGTGCTTTGTATCGATTGGAGCTGAAACTTGTCGATGGGAAAAAAGGTTCCAAGGCAAAGGTAACCAACGATTCAGTTACTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAATTTCCTGATAATAAACGCCTTGTGAAGGGGAGGACCAGAATTAACACAAAAGTTGGTATTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCACCCAATGGAACATATGACTATATGCTTCATGCACAATATGATTACCTGGTGGAGAATTTGAGCGAATATTACCTTACATAG 1482 44.6 MGKHSKTSCKSASHKLFKDKAKNRVDDLQNIFVDLQYARKESRTVDVSVLEEQVHQMLREWKSELNEPSPASSLQQGGSFGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDAMAHQEVLSITINLLQGFNVNRIHQEPSFPLVDQCKNSPSGVHGMVMNNMEGPTHSECHPFDLQQGIEHNFYTILNARGLCGEGAIPHVSGYCPSICPPPAAFLGPKCALWDCPRPAQGMDWCGDYCSSFHTALALNEGPPGMGPVLRPGGIGLKDGLLFAALRAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVTNDSVTDLQRQMGRLTAEFPDNKRLVKGRTRINTKVGIGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 993139 997714 - Cp4.1LG10g05070.1 Cpe10g00166 475703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00166 493 PANTHER TRANSCRIPTION FACTOR VOZ1 1 493 IPR039277 GO:0006355|GO:0048578
Cpe10g00166 493 PANTHER TRANSCRIPTION FACTOR VOZ1 1 493 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00166 Cpe19g01043 CCT
Cpe10g00166 Cpe19g01043 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00166 Cpe-Chr10:993139 Cpe16g00412 Cpe-Chr16:5578409 6.25E-178 wgd
Cpe10g00166 Cpe-Chr10:993139 Cpe19g01043 Cpe-Chr19:7214459 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50073 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00166 - - csv:101219536 942.184