Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00186 ATGGAGGCTATTACTGTCATTTCACAGAGCAGTTTGAATCCCTTAAATCTCAACAGAAATCAGCTTATATCTCCCACTTCTTCGATTAGTTTTTGCACAATGGCTCGTGATCTCAGACTCCATGCACTCATAGTGCTTCTGCTTCTCGTCTCCTTCTGGACTCCATCCTGTTCGGAGTCAATTCCAACTCCTAATTCCCAATGCCAAACTCAGCTCCAACAAGGCTGCCATGACAGACACAAGTCCCTCAAACTCAAGCTCATCGCCATCGCAACCATTTTAGTTGCGAGCATGATCGGCGTTTGTCTTCCCCTGTTCTCCCGCGCGGTACCGCTGCTTCAACCAGAGGGAAGCCCCTTCGCAATCGTTAAGGCATTTGCCTCCGGCGTGATTTTAGCCACTGGGTATATGCACGTTTTGCCCGATTCGTTCAATTGCTTGACATCCCCTTGTTTGCCGGAGAACCCATGGCGGAAATTCCCTTTCACCACATTCATAGCCATGATTTCGGCTGTGATGACTTTAATGTTGGACTCGTTTTCGATGAGTCGATACAAGAAAGAGTTGATGGAGGCTCAAGTTGCAGAAGAAGAACAGAACGAGGGCATGGAAATCGATGACAACTCGGGGAGAGAAGAAGGAACCAATAAAAAACTTGGTGCGAAATTGGTACGACACCGTGTTATTGCGCAATTATTAGAAGCAGGGATCGTTGTGCATTCTGTGGTGATAGGGCTTTCAATGGGGGCTTCGGAAAATCCGTGCACCATCAGGCCGCTCATCGCTGCTCTCTGCTTCCATCAGCTGTTTGAAGGGATGGGGCTTGGAGGGTGCATTCTGCAAGCGGAATACGGGTTCAAGATGAAAGCAATCATGGTGTTTTTCTTCTCGATCACGACGCCGTTTGGAATAGCATTGGGGATTGGGTTGTCGAATGTGTATAGTGATAATAGTCCCACGGCTCTTATAGTTGTGGGGGTTTTGAATGCTTTATCTGCTGGGTTGCTGAATTATATGGCATTGGTTGATTTGTTGGCGTTTGATTTCATGGGGCCCAAGTTGCAAGCCAATCTCACGCTTCATATATGGGCTTACGTTGCTGTTTTTCTGGGCGCTGGAGGCATGTCTTTGATGGCTAAATGGGCTTAG 1149 47.61 MEAITVISQSSLNPLNLNRNQLISPTSSISFCTMARDLRLHALIVLLLLVSFWTPSCSESIPTPNSQCQTQLQQGCHDRHKSLKLKLIAIATILVASMIGVCLPLFSRAVPLLQPEGSPFAIVKAFASGVILATGYMHVLPDSFNCLTSPCLPENPWRKFPFTTFIAMISAVMTLMLDSFSMSRYKKELMEAQVAEEEQNEGMEIDDNSGREEGTNKKLGAKLVRHRVIAQLLEAGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGFKMKAIMVFFFSITTPFGIALGIGLSNVYSDNSPTALIVVGVLNALSAGLLNYMALVDLLAFDFMGPKLQANLTLHIWAYVAVFLGAGGMSLMAKWA 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1089869 1091017 + Cp4.1LG10g05060.1 Cpe10g00186 475723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00186 382 PANTHER ZINC TRANSPORTER 7 65 382 - -
Cpe10g00186 382 Pfam ZIP Zinc transporter 84 379 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe10g00186 382 PANTHER ZINC/IRON TRANSPORTER 65 382 - -
Cpe10g00186 382 Coils Coil 382 382 - -
Cpe10g00186 382 TIGRFAM zip: ZIP zinc/iron transport family 68 382 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00560 Cpe-Chr7:3723601 Cpe10g00186 Cpe-Chr10:1089869 1.06E-95 dispersed
Cpe10g00186 Cpe-Chr10:1089869 Cpe15g00906 Cpe-Chr15:8697039 5.42E-86 dispersed
Cpe10g00186 Cpe-Chr10:1089869 Cpe09g00693 Cpe-Chr9:6137273 4.11E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00186 K14709 - csv:101204028 525.398