Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00212 CCCATGTCTAAGGATGTTGAAGCCGGAATCCGCGGCGGCTTTTCCGCCGGGGACTACCTCGATCAGCCTCCAGCTCCGTTTTTCGACGCCGACGAGCTTTCCCGGTGGTCGTTTTACAGGGCCATCATCGCTGAGTTCATTGCCACGCTTTTGTTTCTCTACGTCGGAGTGCTCACTGTGATTGGAAACCAGAGGCAGTCTTCTGCCTCCGCCTGCGGCGGCGTTGGCGTTCTGGGTATCGCTTGGGCGTTCGGTGGCACCATCTTCGTTCTCGTTTACTGTACCGCCGGCATTTCTGGCGAATTAAATCCATGGCTTTTTGGTCCTAAATTTGGAGGACATATAAACCCAGCAGTGACATTTGGGCTGTTCATGGGTCGGAAGGTTTCGTTGGTCAGAGCTGTACTGTACATAGCAGCTCAGTGTTTGGGAGCCATTTGTGGGTGTGGGCTGGTGAAGTCATTAAAGAAGGCTAACTTTAATGACCTCGGCGGTGGAGCCACCGAGCTCGCCGACGGTTTCAGTCCCATCGCCGGCCTGGCCGCCGAGATCATCGGAACCTTCGTTCTTGTATACACCGTCTTCTCTGCCACCGATCCGAAGAGAAAAGCCAGAGATTCCCACGTTCCTGTTCTAGCGCCGCTGCCAATTGGGTTTGCCGTGTTCGTGGTGAATTTGGCCACTATTCCGGTCACCGGCGCCGGCATTAACCCAGCTCGAAGCTTCGGCTCTGCAGTGATGTTCAACAAACACAAAGCTTGGGATAACCACTGGATATTCTGGGCCGGACCTTTCATCGGAGCTGCAATGGCTGCAATTTACCATGAATTTGTTCTGAGAGGAGGTGCTGCGAAGACCTTGAGATCCTTCCGGAGTTCCTCAATTTAA 888 53.83 PMSKDVEAGIRGGFSAGDYLDQPPAPFFDADELSRWSFYRAIIAEFIATLLFLYVGVLTVIGNQRQSSASACGGVGVLGIAWAFGGTIFVLVYCTAGISGELNPWLFGPKFGGHINPAVTFGLFMGRKVSLVRAVLYIAAQCLGAICGCGLVKSLKKANFNDLGGGATELADGFSPIAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNKHKAWDNHWIFWAGPFIGAAMAAIYHEFVLRGGAAKTLRSFRSSSI 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1212635 1213724 - Cp4.1LG10g04770.1 Cpe10g00212 475749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00212 295 Gene3D Glycerol uptake facilitator protein. 25 295 IPR023271 -
Cpe10g00212 295 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 293 IPR034294 -
Cpe10g00212 295 TIGRFAM MIP: MIP family channel proteins 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PANTHER AQUAPORIN PIP2-1 7 293 - -
Cpe10g00212 295 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Cpe10g00212 295 Pfam Major intrinsic protein 32 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 SUPERFAMILY Aquaporin-like 32 280 IPR023271 -
Cpe10g00212 295 CDD MIP 40 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PRINTS Major intrinsic protein family signature 258 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00212 295 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00212 Cpe-Chr10:1212635 Cpe10g00216 Cpe-Chr10:1223766 3.40E-138 dispersed
Cpe20g00187 Cpe-Chr20:1083503 Cpe10g00212 Cpe-Chr10:1212635 3.29E-35 dispersed
Cpe10g00212 Cpe-Chr10:1212635 Cpe10g00214 Cpe-Chr10:1222454 8.67E-47 proximal
Cpe01g02241 Cpe-Chr1:19049402 Cpe10g00212 Cpe-Chr10:1212635 8.64E-147 wgd
Cpe10g00212 Cpe-Chr10:1212635 Cpe16g00536 Cpe-Chr16:6270595 3.65E-146 wgd
Cpe10g00212 Cpe-Chr10:1212635 Cpe08g01099 Cpe-Chr8:8324588 3.58E-138 wgd
Cpe10g00212 Cpe-Chr10:1212635 Cpe09g00420 Cpe-Chr9:2660647 8.41E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00212 K09872 - csv:101215842 490.73