Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00212 | CCCATGTCTAAGGATGTTGAAGCCGGAATCCGCGGCGGCTTTTCCGCCGGGGACTACCTCGATCAGCCTCCAGCTCCGTTTTTCGACGCCGACGAGCTTTCCCGGTGGTCGTTTTACAGGGCCATCATCGCTGAGTTCATTGCCACGCTTTTGTTTCTCTACGTCGGAGTGCTCACTGTGATTGGAAACCAGAGGCAGTCTTCTGCCTCCGCCTGCGGCGGCGTTGGCGTTCTGGGTATCGCTTGGGCGTTCGGTGGCACCATCTTCGTTCTCGTTTACTGTACCGCCGGCATTTCTGGCGAATTAAATCCATGGCTTTTTGGTCCTAAATTTGGAGGACATATAAACCCAGCAGTGACATTTGGGCTGTTCATGGGTCGGAAGGTTTCGTTGGTCAGAGCTGTACTGTACATAGCAGCTCAGTGTTTGGGAGCCATTTGTGGGTGTGGGCTGGTGAAGTCATTAAAGAAGGCTAACTTTAATGACCTCGGCGGTGGAGCCACCGAGCTCGCCGACGGTTTCAGTCCCATCGCCGGCCTGGCCGCCGAGATCATCGGAACCTTCGTTCTTGTATACACCGTCTTCTCTGCCACCGATCCGAAGAGAAAAGCCAGAGATTCCCACGTTCCTGTTCTAGCGCCGCTGCCAATTGGGTTTGCCGTGTTCGTGGTGAATTTGGCCACTATTCCGGTCACCGGCGCCGGCATTAACCCAGCTCGAAGCTTCGGCTCTGCAGTGATGTTCAACAAACACAAAGCTTGGGATAACCACTGGATATTCTGGGCCGGACCTTTCATCGGAGCTGCAATGGCTGCAATTTACCATGAATTTGTTCTGAGAGGAGGTGCTGCGAAGACCTTGAGATCCTTCCGGAGTTCCTCAATTTAA | 888 | 53.83 | PMSKDVEAGIRGGFSAGDYLDQPPAPFFDADELSRWSFYRAIIAEFIATLLFLYVGVLTVIGNQRQSSASACGGVGVLGIAWAFGGTIFVLVYCTAGISGELNPWLFGPKFGGHINPAVTFGLFMGRKVSLVRAVLYIAAQCLGAICGCGLVKSLKKANFNDLGGGATELADGFSPIAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNKHKAWDNHWIFWAGPFIGAAMAAIYHEFVLRGGAAKTLRSFRSSSI | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1212635 | 1213724 | - | Cp4.1LG10g04770.1 | Cpe10g00212 | 475749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00212 | 295 | Gene3D | Glycerol uptake facilitator protein. | 25 | 295 | IPR023271 | - | |
Cpe10g00212 | 295 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 293 | IPR034294 | - | |
Cpe10g00212 | 295 | TIGRFAM | MIP: MIP family channel proteins | 44 | 274 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PANTHER | AQUAPORIN PIP2-1 | 7 | 293 | - | - | |
Cpe10g00212 | 295 | ProSitePatterns | MIP family signature. | 114 | 122 | IPR022357 | - | |
Cpe10g00212 | 295 | Pfam | Major intrinsic protein | 32 | 275 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | SUPERFAMILY | Aquaporin-like | 32 | 280 | IPR023271 | - | |
Cpe10g00212 | 295 | CDD | MIP | 40 | 278 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PRINTS | Major intrinsic protein family signature | 133 | 152 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PRINTS | Major intrinsic protein family signature | 182 | 200 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PRINTS | Major intrinsic protein family signature | 218 | 240 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PRINTS | Major intrinsic protein family signature | 258 | 278 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PRINTS | Major intrinsic protein family signature | 96 | 120 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00212 | 295 | PRINTS | Major intrinsic protein family signature | 40 | 59 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00212 | Cpe-Chr10:1212635 | Cpe10g00216 | Cpe-Chr10:1223766 | 3.40E-138 | dispersed | |
Cpe20g00187 | Cpe-Chr20:1083503 | Cpe10g00212 | Cpe-Chr10:1212635 | 3.29E-35 | dispersed | |
Cpe10g00212 | Cpe-Chr10:1212635 | Cpe10g00214 | Cpe-Chr10:1222454 | 8.67E-47 | proximal | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe10g00212 | Cpe-Chr10:1212635 | 8.64E-147 | wgd | |
Cpe10g00212 | Cpe-Chr10:1212635 | Cpe16g00536 | Cpe-Chr16:6270595 | 3.65E-146 | wgd | |
Cpe10g00212 | Cpe-Chr10:1212635 | Cpe08g01099 | Cpe-Chr8:8324588 | 3.58E-138 | wgd | |
Cpe10g00212 | Cpe-Chr10:1212635 | Cpe09g00420 | Cpe-Chr9:2660647 | 8.41E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00212 | K09872 | - | csv:101215842 | 490.73 |