Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00214 ATGTCGAAGGATATTGAAGCCGGAGGGCGTGGTGGGTTTAGCGGCAAGGATTACCAAGACCCGCCGGCAGCGCCATTGATCGACGCACAGGAGTTTGCTCAGTGGTCATTTTACCGAGCCATTATAGCCGAGTTTGTTGCTACCCTTTTGTTCTTGTATGTCACTGTTCTCACTGTCATTGGGTATAAAGTTCAGAGTGATGTTGACAATGGAGGCCAGATTTGCGGCGGCGTCGGCATTTTGGGCATCGCTTGGGCCTTCGGCGGCATGATTTTTGTACTCGTTTACTGCACCGCCGGTATTTCCGGTGAGTTCAATGAATCAAATAGGGCAAGATTAATTTAA 345 49.28 MSKDIEAGGRGGFSGKDYQDPPAAPLIDAQEFAQWSFYRAIIAEFVATLLFLYVTVLTVIGYKVQSDVDNGGQICGGVGILGIAWAFGGMIFVLVYCTAGISGEFNESNRARLI 114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1222454 1222798 + Cp4.1LG10g04870.1 Cpe10g00214 475751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00214 114 Pfam Major intrinsic protein 32 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00214 114 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 104 IPR034294 -
Cpe10g00214 114 Gene3D Glycerol uptake facilitator protein. 24 106 IPR023271 -
Cpe10g00214 114 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00214 114 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00214 114 PANTHER AQUAPORIN PIP2-4-RELATED 1 104 - -
Cpe10g00214 114 SUPERFAMILY Aquaporin-like 31 103 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00214 Cpe-Chr10:1222454 Cpe19g00409 Cpe-Chr19:3617325 7.11E-57 dispersed
Cpe10g00212 Cpe-Chr10:1212635 Cpe10g00214 Cpe-Chr10:1222454 8.67E-47 proximal
Cpe10g00214 Cpe-Chr10:1222454 Cpe10g00216 Cpe-Chr10:1223766 7.27E-42 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00214 K09872 - csv:101216085 177.948