Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00216 | ATGGGTGCAGCAGCCATGTCTAAGGATCTCGAAGCCGGTGGGTTCGCTACCAAGGACTACCAAGACCCACCACCAGCACCGTTGATCGACGCCGACGAGTTCACTCAATGGTCTTTTTACAGAGCCATCATCGCCGAGTTCGTCGCCACGCTTTTGTTCTTGTACGTCACTGTTCTCACTGTCATTGGCTACAGTAACCAGTCCGACATAAAAAACGGCGGCCAAATCTGCGGCGGGGTCGGCATTCTTGGCATCGCTTGGGCATTCGGCGGCATGATTTTCGTCCTCGTTTACTGTACCGCTGGAATTTCCGGAGGGCACATTAACCCGGCGGTGACTTTTGGGTTGTTTTTGGCTCGGAAAGTGTCTTTGGTTAGAGCAGTTCTTTACATGGCGGCTCAATGTTTGGGCGCCATTTGTGGGTGTGCTTTAGTGAAATCGTTCCAGAAGGCTCATTACAGTGAGTACGGCGGTGGAGCCAATTCACTCGCCGATGGCTACAGCACCGGCACCGGCTTAGCCGCAGAAATCATCGGAACTTTCGTTCTTGTTTACACCGTCTTCTCCGCCACCGATCCCAAGAGGAATGCCAGAGATTCTCACGTTCCTGTTTTGGCGCCACTCCCAATTGGGTTCGCGGTGTTTATGGTTCATTTGGCCACCATTCCGATCACCGGCACCGGCATCAACCCAGCTCGAAGCTTTGGAGCCGCCGTGATCTTTAACAAAGACAAGCCATGGGATGACCAGTGGATCTTTTGGGTTGGCCCCTTCATTGGAGCTGCCATTGCTGCAATTTATCACCAAATCATACTGAGAGCAGGGGCAGTTAAAGCTCTGGGATCGTTCAGAAGAGCAATGTCGTCCAACAGTGTCTTTGAGCGCAGAAGCAATGGTGGGTTGGCCGCCACCGCCAAGGACTACCAAGACCCGCCGCCCGCTCCGTTCATCGACGCCGGGGAGTTCACTCAGTGGTCATTTTACAGAGCTATCACCGTCGAATTCGTCGCCACGCTTCTGTTCTTGTACATTCTTGTTCTCACTGTGATTGGCTATGACACCCAGTCCGCCACCAATGTCTGCGGCGGTGTCGGCGTTTTGGGCATTGCCTGGGCCGTCGGTGGAATGATCTTCGTTCTCGTTTACTGCACCGCTGGAATTTCAGGCGAGTTTAGAGGGCATATTAACCCGGCGGTGACATTTGGGCTGTTCTTGGCTCGAAAAATCTCCCTAATCAGAGCTGTGTTTTACATTATGGCTCAATGTTTGGGCGCCATTTGTGGGTGTGCGTTGGCTAAATCATTCCAGAAGGGTTATTACGTTCGCTACAGAGGTGGAACCAATATACTCGCCGATGGGTACAGCATCACCACCGGCTTAGCCGCAGAGATCGCCGGAACTTTCATTCTTGTTTACACCGTCTTCTCCGCCACCGACCCCAAGAGAAACGCCAGAGATTCTCACGTCCCTGTTTTGGCGCCACTCCCAATTGGATTCGCGGTGTTTATAGTTCATTTAGCCACCATTCCGATCACCGGCACCGGCATCAACCCAGCTCGAAGCTTTGGAGCTGCAGTGATCTATAACAGAACGGAGGCCTGGGATCATCATTGGATCTTTTGGGTTGGGCCGTTCGTCGGAGCTGCCATTGCTGCAATTTATCATCAAGTCATAATTAGAGCAGGAGCTGTTAAAGCTCTTGGATCATTCAAAACTTCCTCCGCCCTATAA | 1731 | 52.28 | MGAAAMSKDLEAGGFATKDYQDPPPAPLIDADEFTQWSFYRAIIAEFVATLLFLYVTVLTVIGYSNQSDIKNGGQICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMAAQCLGAICGCALVKSFQKAHYSEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKDKPWDDQWIFWVGPFIGAAIAAIYHQIILRAGAVKALGSFRRAMSSNSVFERRSNGGLAATAKDYQDPPPAPFIDAGEFTQWSFYRAITVEFVATLLFLYILVLTVIGYDTQSATNVCGGVGVLGIAWAVGGMIFVLVYCTAGISGEFRGHINPAVTFGLFLARKISLIRAVFYIMAQCLGAICGCALAKSFQKGYYVRYRGGTNILADGYSITTGLAAEIAGTFILVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSFGAAVIYNRTEAWDHHWIFWVGPFVGAAIAAIYHQVIIRAGAVKALGSFKTSSAL | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1223766 | 1229506 | + | Cp4.1LG10g04850.1 | Cpe10g00216 | 475753 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00216 | 576 | ProSitePatterns | MIP family signature. | 107 | 115 | IPR022357 | - | |
Cpe10g00216 | 576 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 285 | IPR034294 | - | |
Cpe10g00216 | 576 | PANTHER | PLASMAMEMBRANE INTRINSIC PROTEIN 25 | 303 | 572 | - | - | |
Cpe10g00216 | 576 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 303 | 572 | IPR034294 | - | |
Cpe10g00216 | 576 | SUPERFAMILY | Aquaporin-like | 33 | 273 | IPR023271 | - | |
Cpe10g00216 | 576 | ProSitePatterns | MIP family signature. | 394 | 402 | IPR022357 | - | |
Cpe10g00216 | 576 | TIGRFAM | MIP: MIP family channel proteins | 334 | 554 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | TIGRFAM | MIP: MIP family channel proteins | 45 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | CDD | MIP | 41 | 271 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | Pfam | Major intrinsic protein | 322 | 555 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | Pfam | Major intrinsic protein | 34 | 268 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | CDD | MIP | 329 | 558 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | Gene3D | Glycerol uptake facilitator protein. | 314 | 576 | IPR023271 | - | |
Cpe10g00216 | 576 | Gene3D | Glycerol uptake facilitator protein. | 26 | 289 | IPR023271 | - | |
Cpe10g00216 | 576 | SUPERFAMILY | Aquaporin-like | 321 | 560 | IPR023271 | - | |
Cpe10g00216 | 576 | PRINTS | Major intrinsic protein family signature | 89 | 113 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | PRINTS | Major intrinsic protein family signature | 41 | 60 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | PRINTS | Major intrinsic protein family signature | 251 | 271 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | PRINTS | Major intrinsic protein family signature | 175 | 193 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | PRINTS | Major intrinsic protein family signature | 126 | 145 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | PRINTS | Major intrinsic protein family signature | 211 | 233 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00216 | 576 | PANTHER | PLASMAMEMBRANE INTRINSIC PROTEIN 25 | 7 | 285 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00216 | Cpe19g00410 | CCT | |
Cpe10g00216 | Cpe19g00410 | ECH | |
Cpe08g01099 | Cpe10g00216 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00821 | Cpe-Chr5:5093243 | Cpe10g00216 | Cpe-Chr10:1223766 | 2.83E-151 | dispersed | |
Cpe08g01099 | Cpe-Chr8:8324588 | Cpe10g00216 | Cpe-Chr10:1223766 | 8.78E-137 | dispersed | |
Cpe09g00420 | Cpe-Chr9:2660647 | Cpe10g00216 | Cpe-Chr10:1223766 | 1.73E-134 | dispersed | |
Cpe10g00212 | Cpe-Chr10:1212635 | Cpe10g00216 | Cpe-Chr10:1223766 | 3.40E-138 | dispersed | |
Cpe10g00216 | Cpe-Chr10:1223766 | Cpe19g00409 | Cpe-Chr19:3617325 | 3.75E-152 | dispersed | |
Cpe10g01037 | Cpe-Chr10:6046978 | Cpe10g00216 | Cpe-Chr10:1223766 | 1.45E-11 | dispersed | |
Cpe19g00188 | Cpe-Chr19:1531992 | Cpe10g00216 | Cpe-Chr10:1223766 | 3.00E-11 | dispersed | |
Cpe10g00214 | Cpe-Chr10:1222454 | Cpe10g00216 | Cpe-Chr10:1223766 | 7.27E-42 | proximal | |
Cpe10g00215 | Cpe-Chr10:1222911 | Cpe10g00216 | Cpe-Chr10:1223766 | 7.08E-35 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00216 | K09872 | - | csv:101215366 | 529.635 |