Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00221 ATGGAGATGGGATCAGTCACAGTAAGATTCGAAGAGGAAGAGCTTGAAAATGGTGAATCAGAGAGGAGGAGAAAGAGAGGGAAAAGGAAAGAGGCGGAGGATGGAATGGTATTAGATCCAAGGCTGCCCATATTGAACGCATGGAACAGGATTTTTCTGGTGGCTTGTCTGGTTTCACTATTTGTGGACCCTCTCTTCTTCTTCCTGCCCCTCGTCAATACCGAGGATGTCTGCGTCGAAACCAGCCGAGGGCTCGCCGTGGCGCTGACCGTGGTTCGATCCATGGCGGATGTGTTCTACATAATCCACATAGTGGTGAGGTTTAGGACAGCTTATGTAGCTCCCTCCTCCAGGATCTTTGGAAGAGGGGAGCTCGCATTCATATGGGCTGCAATCCCAAACATGATGAGGGGTTCAAACATGAGCCCATGGAGTTACTTGGTTCGGTTCTCCATTCTGTTCCAGTACCTGTTGAGGCTGTATCTCATCTTCCCTCTATCTGAACAGATCATTAAGGCCACTGGAGCTCTGATGAAAACGGCATGGGCTGGAGCTGTCTATAACCTAATGCTCTTCATGCTTGCAAGCCACGTTTTGGGGTCGTGTTGGTACCTTTTATCCATAGGACGACAAATGGAATGCTGGAAAAAGGTCTGCAGTTTGGGGGAGCTGGATTGCGGATATGGGCTTTTTAGTTGTAAGGCTAGCAGAGGTGCTTGGTTTGAAGCAACCAATGTTTCAAATCTTTGTCATCCAAGTGCCACCACTTTCTTCCATTTTGGCATCTTTTCTGATTCTTTTGCATCAACTTCTTCCTCCTTTTTCAGTAGCTCTCTAGGACAAAATTTGCTAACAAGTAGCAATGTGGGAGAGATCAATTTCGCCATTGTGATTGCGATTGTGGGCTTGGTTCTTTTCGCTCTTCTTATTGGGAATATGCAAACTTACCTCCAATCGACGACATTGAGGCTAGAAGAGTGGAGGGTGCGGCGGAGAGACACAGAGCAATGGATGCAGCACAGGCAGCTGCCATACGAACTGAAGCAAAGCGTGAGAAAATACGAGCAATTCAGATGGATGGCAACCCATGGGGTAAACGAAGAAGACATCCTGAAAGGCCTTCCTCTGGACCTCCGACGAGACATCAAGCGGCATCTCTGCCTCGATCTCGTCCGCCAGGTTCCCCTGTTCGACGAAATGGAGGAGAGAATGTTGGACGCTATATGCGAAAGGTTGAGACCCTGTTTAAGCACTTCCAATACATGCTTGGTCCGGGAAGGCGACCCAGTCAACGAGATGCTGTTTATAATCCGTGGCCATTTGGATTCCCACACCACGAATGGCGGCCGGACTGGGTTCTTCAATTCCAGCCGTCTCGGACCGAGTGACTTCTGTGGCGAGGAGCTACTTCCATGGGCGTTGGACCCTGGAGCAGCCGCGGTGCTACCATCGTCGACTCGCACTGTGAAGGCCGTCACGGAAGTGGAAGGGTTCGCGCTCATTGCGGAGGATTTGAAATTCGTGGCGGCCCAGTTCCGGAGGCTTCACAGTAAGCAGCTTAGGTACACTTTCAGGTTCCACTCGCACCAGTGGCGGACGTGGGCGGCGTGCTTTATACAGGCCGCGTGGTTTAGATATAAGCGGCGGCGGAAGGAGGGGAAGAAGAATAACATTAATGTTGTTAGGAAGTATGCCGACAACTGTAGGAGGGTTGTCGGAGCTGGTGGTGGTGGCAGTAGCCGATGTTGTGATGGCGGCGAGATGAATGCGGTTCATGGTTCGCTGCTGAAGCCACTTGAACCTGATTTCTCGGTGGAACACAGATGA 1827 50.68 MEMGSVTVRFEEEELENGESERRRKRGKRKEAEDGMVLDPRLPILNAWNRIFLVACLVSLFVDPLFFFLPLVNTEDVCVETSRGLAVALTVVRSMADVFYIIHIVVRFRTAYVAPSSRIFGRGELAFIWAAIPNMMRGSNMSPWSYLVRFSILFQYLLRLYLIFPLSEQIIKATGALMKTAWAGAVYNLMLFMLASHVLGSCWYLLSIGRQMECWKKVCSLGELDCGYGLFSCKASRGAWFEATNVSNLCHPSATTFFHFGIFSDSFASTSSSFFSSSLGQNLLTSSNVGEINFAIVIAIVGLVLFALLIGNMQTYLQSTTLRLEEWRVRRRDTEQWMQHRQLPYELKQSVRKYEQFRWMATHGVNEEDILKGLPLDLRRDIKRHLCLDLVRQVPLFDEMEERMLDAICERLRPCLSTSNTCLVREGDPVNEMLFIIRGHLDSHTTNGGRTGFFNSSRLGPSDFCGEELLPWALDPGAAAVLPSSTRTVKAVTEVEGFALIAEDLKFVAAQFRRLHSKQLRYTFRFHSHQWRTWAACFIQAAWFRYKRRRKEGKKNNINVVRKYADNCRRVVGAGGGGSSRCCDGGEMNAVHGSLLKPLEPDFSVEHR 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1262951 1265557 - Cp4.1LG10g04740.1 Cpe10g00221 475758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00221 608 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 30 125 - -
Cpe10g00221 608 Pfam Ion transport protein 47 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe10g00221 608 MobiDBLite consensus disorder prediction 1 30 - -
Cpe10g00221 608 SMART cnmp_10 396 527 IPR000595 -
Cpe10g00221 608 CDD CAP_ED 396 527 IPR000595 -
Cpe10g00221 608 Gene3D Helix hairpin bin 324 387 - -
Cpe10g00221 608 ProSiteProfiles cAMP/cGMP binding motif profile. 396 481 IPR000595 -
Cpe10g00221 608 PANTHER PROTEIN CNGC15A 30 125 - -
Cpe10g00221 608 SUPERFAMILY cAMP-binding domain-like 326 518 IPR018490 -
Cpe10g00221 608 PANTHER PROTEIN CNGC15A 127 605 - -
Cpe10g00221 608 SUPERFAMILY Voltage-gated potassium channels 46 318 - -
Cpe10g00221 608 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 127 605 - -
Cpe10g00221 608 Gene3D Jelly Rolls 394 514 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00221 Cpe-Chr10:1262951 Cpe18g00596 Cpe-Chr18:6342951 0 dispersed
Cpe10g00221 Cpe-Chr10:1262951 Cpe16g00526 Cpe-Chr16:6198876 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00221 K05391 - csv:101221856 831.247