Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00246 | ATGCCGATCCGTAACATCGCCGTTGGAAGGCCCGATGAGGCTACCAGTCCGGATGCTTTGAAGGCTGGGTTGGCTGAGTTCATTTCCACCTTGATTTTTGTTTTTGCCGGCCAAGGTTCCGGCATAGCCTTCAGTAAGCTTACTGACGGCGGCGCCGCCACTCCCGCTGGCCTCATCTCCGCCTCCATCGCTCATGCCTTTGCCCTGTTTGTCGCCGTCTCCGTCGGCGCTAACATCTCTGGCGGCCACGTCAACCCCGCTGTTACCTTCGGCGCCTTCGTCGGCGGTAACATCACCCTCCTACGTGGCATCATCTACTGGATTGCCCAGCTCCTCGGATCCGTCGTTGCCTGCTTGCTCCTTAAATTCGTTACTGGCTTGCCCACCGGAAGCTTCGCTCTATCAGCTGGAGTCGGTGAACTAAACGCCTTCGTTTTCGAGATCGTGATGACATTCGGATTGGTGTACACAGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACAATTGCACCCATCGCAATCGGTTTCATCGTCGGAGCTAACATCTTAGCCGGTGGAGCATTCACCGGAGCCTCAATGAACCCAGCTGTGGCATTTGGACCATCCGTGGTGAGCTGGTCATGGGACAACCACTGGGTCTACTGGGCTGGACCTCTGATCGGAGGTGGTCTTGCTGGGCTCATCTACGAGTTCATCTTCATCTCCAACTCCCACGAGCAACTCCCGACCACCGACTACTAA | 753 | 56.44 | MPIRNIAVGRPDEATSPDALKAGLAEFISTLIFVFAGQGSGIAFSKLTDGGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFALSAGVGELNAFVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWDNHWVYWAGPLIGGGLAGLIYEFIFISNSHEQLPTTDY | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1431950 | 1433676 | - | Cp4.1LG10g04400.1 | Cpe10g00246 | 475783 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00246 | 250 | PANTHER | AQUAPORIN TIP1-1 | 1 | 250 | - | - | |
Cpe10g00246 | 250 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | PRINTS | Major intrinsic protein family signature | 146 | 164 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | PRINTS | Major intrinsic protein family signature | 179 | 201 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | PRINTS | Major intrinsic protein family signature | 216 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | Pfam | Major intrinsic protein | 14 | 233 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | CDD | MIP | 21 | 236 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g00246 | 250 | PANTHER | AQUAPORIN-8 | 1 | 250 | IPR034294 | - | |
Cpe10g00246 | 250 | Gene3D | Glycerol uptake facilitator protein. | 4 | 250 | IPR023271 | - | |
Cpe10g00246 | 250 | SUPERFAMILY | Aquaporin-like | 13 | 245 | IPR023271 | - | |
Cpe10g00246 | 250 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00246 | Cpe19g00437 | CCT | |
Cpe03g00205 | Cpe10g00246 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe09g01081 | Cpe-Chr9:9366928 | Cpe10g00246 | Cpe-Chr10:1431950 | 9.41E-99 | dispersed | |
Cpe10g00246 | Cpe-Chr10:1431950 | Cpe20g00187 | Cpe-Chr20:1083503 | 6.50E-105 | dispersed | |
Cpe05g00252 | Cpe-Chr5:1436359 | Cpe10g00246 | Cpe-Chr10:1431950 | 1.86E-97 | transposed | |
Cpe07g00219 | Cpe-Chr7:1415743 | Cpe10g00246 | Cpe-Chr10:1431950 | 6.00E-81 | transposed | |
Cpe17g00544 | Cpe-Chr17:4517086 | Cpe10g00246 | Cpe-Chr10:1431950 | 2.42E-99 | transposed | |
Cpe10g00246 | Cpe-Chr10:1431950 | Cpe19g00437 | Cpe-Chr19:3899285 | 7.09E-143 | wgd | |
Cpe10g00246 | Cpe-Chr10:1431950 | Cpe03g00205 | Cpe-Chr3:1022954 | 2.05E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00246 | K09873 | - | csv:101204225 | 469.159 |