Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00246 ATGCCGATCCGTAACATCGCCGTTGGAAGGCCCGATGAGGCTACCAGTCCGGATGCTTTGAAGGCTGGGTTGGCTGAGTTCATTTCCACCTTGATTTTTGTTTTTGCCGGCCAAGGTTCCGGCATAGCCTTCAGTAAGCTTACTGACGGCGGCGCCGCCACTCCCGCTGGCCTCATCTCCGCCTCCATCGCTCATGCCTTTGCCCTGTTTGTCGCCGTCTCCGTCGGCGCTAACATCTCTGGCGGCCACGTCAACCCCGCTGTTACCTTCGGCGCCTTCGTCGGCGGTAACATCACCCTCCTACGTGGCATCATCTACTGGATTGCCCAGCTCCTCGGATCCGTCGTTGCCTGCTTGCTCCTTAAATTCGTTACTGGCTTGCCCACCGGAAGCTTCGCTCTATCAGCTGGAGTCGGTGAACTAAACGCCTTCGTTTTCGAGATCGTGATGACATTCGGATTGGTGTACACAGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACAATTGCACCCATCGCAATCGGTTTCATCGTCGGAGCTAACATCTTAGCCGGTGGAGCATTCACCGGAGCCTCAATGAACCCAGCTGTGGCATTTGGACCATCCGTGGTGAGCTGGTCATGGGACAACCACTGGGTCTACTGGGCTGGACCTCTGATCGGAGGTGGTCTTGCTGGGCTCATCTACGAGTTCATCTTCATCTCCAACTCCCACGAGCAACTCCCGACCACCGACTACTAA 753 56.44 MPIRNIAVGRPDEATSPDALKAGLAEFISTLIFVFAGQGSGIAFSKLTDGGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFALSAGVGELNAFVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWDNHWVYWAGPLIGGGLAGLIYEFIFISNSHEQLPTTDY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1431950 1433676 - Cp4.1LG10g04400.1 Cpe10g00246 475783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00246 250 PANTHER AQUAPORIN TIP1-1 1 250 - -
Cpe10g00246 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g00246 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Cpe10g00246 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Cpe10g00246 250 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Cpe10g00246 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00246 Cpe19g00437 CCT
Cpe03g00205 Cpe10g00246 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01081 Cpe-Chr9:9366928 Cpe10g00246 Cpe-Chr10:1431950 9.41E-99 dispersed
Cpe10g00246 Cpe-Chr10:1431950 Cpe20g00187 Cpe-Chr20:1083503 6.50E-105 dispersed
Cpe05g00252 Cpe-Chr5:1436359 Cpe10g00246 Cpe-Chr10:1431950 1.86E-97 transposed
Cpe07g00219 Cpe-Chr7:1415743 Cpe10g00246 Cpe-Chr10:1431950 6.00E-81 transposed
Cpe17g00544 Cpe-Chr17:4517086 Cpe10g00246 Cpe-Chr10:1431950 2.42E-99 transposed
Cpe10g00246 Cpe-Chr10:1431950 Cpe19g00437 Cpe-Chr19:3899285 7.09E-143 wgd
Cpe10g00246 Cpe-Chr10:1431950 Cpe03g00205 Cpe-Chr3:1022954 2.05E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00246 K09873 - csv:101204225 469.159