Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00260 ATGCATTCCAATCACTTGCTTCTCGAGGAGCCTATTCGCATGGCCTCCATCCTTGAGCCATCCAAGGCTAGTTTCTTTCCTGCTATGACCAAGATCGTTGGGACTCTTGGTCCAAGGTCTCGATCTGTTGAGATAATCTCTGGTTGTCTGAAGGCTGGAATGTCGGTTGCTCGTTTCGACTTTTCATGGGGTAACCCTGAATATCATCAGGAGACTTTGGAAAATTTGAAAGCGGCCGTGAAGATCACCAAGAAGCTTTGCGCTGTTATGCTTGACACAGTTGGCCCTGAGTTGCAAGTAATAAATAAAACCGAGAAATCCATTTCACTTCAGGAAGATGCCATAGTCGTCCTTACACCCAATCAAGATCTTGAGGCGACTTCAGAGCTCTTGCCTATTAACTTTACAGGACTTTCAAAGGCTGTGAAGAAAGGAGACACTATTTTCGTGGGTCAGTACCTTTTCACTGGAAGTGAATCAACTTCTGCATGGCTTGAGGTATCTGAAGTCAAAGGCGATGATGTTGTTTGTGTAATTAAGAACTCTGCCACTTTGGCTGGATCACTGTTCACTTTGCATGGCTCTCAAATTCATATTAATCTTCCTACACTTTCTGAGGAGGATAAGGAGGTTATTTCTAGTTGGGGAGTGCAAAACAAAATTGATTTCCTCTCATTATCATATACTAGACATGCTGAAGATGTTCGACAAGCTCGTGAATTCCTTTCTAAGTTAGGTGACCTTAGCCAAACCCAAATCTTTGCCAAGATTGAAACTGTGGAGGGATTAACCCATTTTGATGAGATTCTACAAGAGGCAGATGGTATTATTCTATCCCGTGGGAATTTGGGTATCGACCTCCCACCCGAGAAGGTGTTTTTATTTCAGAAAGCTGCACTTTACAAGTGTAACATGGCTGGAAAGCCTGCCGTGGTTACTCGTGTTGTGGACAGTATGACGAACAATTTAAGACCTACTCGTGCAGAAGCTACTGATGTTGCAAATGCGGTCCTTGATGGGAGTGATGCAATTCTTCTGGGGGCTGAGACTTTGCGTGGACTGTATCCAGTAGAGACTATTTCTACTGTTGGTAGGATTTGTGCTGAGTCTGATAAGGTGTTCAATCAAGACTTGTACTTCAAGAAAACTGTCAAATTTGTTGGGGAACCTATGTCTCACTTGGAATCCATTGCCTCCTCAGCGGTCAGGGCTGCCATTAAGGTGAAGGCTTCAGTTATTATTTGCTTCACTTCATCTGGAAGAGCTGCAAGATTAATTGCTAAATATAGGCCCACAATGCCGGTTATATCTGTTGTCATTCCTAGGCTGAAGACAAATCAGTTAAGGTGGAGCTTTACTGGAGCATTTGAGGCTAGGCAGTCTTTGATAGTAAGAGGCCTCTTCCCTATGCTTGCTGATCCACGACATCCTGCGGAGTCTACTAGCGCAACAAATGAGTCAGTTCTAAAGGTTGCTCTGGATCATGGGAAAGCATATGGAGTAATTAAGTCGCATGACCGAGTTGTTGTTTGTCAGAAGGTTGGGGACGCATCAGTGGTAAAGATTATCGAGCTCGAAGATTGA 1584 43.88 MHSNHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPRSRSVEIISGCLKAGMSVARFDFSWGNPEYHQETLENLKAAVKITKKLCAVMLDTVGPELQVINKTEKSISLQEDAIVVLTPNQDLEATSELLPINFTGLSKAVKKGDTIFVGQYLFTGSESTSAWLEVSEVKGDDVVCVIKNSATLAGSLFTLHGSQIHINLPTLSEEDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIETVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTNNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGRICAESDKVFNQDLYFKKTVKFVGEPMSHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRLKTNQLRWSFTGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKAYGVIKSHDRVVVCQKVGDASVVKIIELED 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1558667 1564687 - Cp4.1LG10g04290.1 Cpe10g00260 475797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00260 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Cpe10g00260 527 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Cpe10g00260 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 PANTHER PYRUVATE KINASE 2 527 - -
Cpe10g00260 527 TIGRFAM pyruv_kin: pyruvate kinase 30 516 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 Pfam Pyruvate kinase, alpha/beta domain 395 522 IPR015795 -
Cpe10g00260 527 Gene3D - 363 525 IPR036918 -
Cpe10g00260 527 PANTHER PYRUVATE KINASE 2 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 SUPERFAMILY PK beta-barrel domain-like 96 186 IPR011037 -
Cpe10g00260 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cpe10g00260 527 Gene3D - 30 362 IPR040442 -
Cpe10g00260 527 SUPERFAMILY PK C-terminal domain-like 358 520 IPR036918 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00260 Cpe19g00448 CCT
Cpe10g00260 Cpe19g00448 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00260 Cpe-Chr10:1558667 Cpe19g00449 Cpe-Chr19:3980668 0 dispersed
Cpe10g00260 Cpe-Chr10:1558667 Cpe19g00448 Cpe-Chr19:3970801 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00260 K00873 - csv:101207102 1003.43