Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00265 ATGGAAATGCCTGGAAGAAGGTCAGATTACACGTTTTTAAGTCAAATTCCGGACGAGGAGGTTGGAACGGGACCTTCCACCTCGTTTTTCGGGTCAATAGCAGCTGAGGCAAACATTAGCAAGGGGAGAACGGATAGAGTCTTTGATTGGGACGGGAGTGGTGATCACAAGTTAAACACGCAGGCGAATCGGATTGGGAACCAGTATTCATGGATTGGTTTGCAGAGGCATTCTAGTGGAAGTAGCTACGATGATAGCTCTCTCGCCAGTGATTACTACGCTCCAACGCTCTCAAACGCAGCAGCAAATGAGATAAATGCATTGGGATATATCCACGACGATGAATTTAGAGTCAAAGCTGTGGGAAATGGAGGTTCGTCGGGGAAGAGCTGGGCACAGCAGACGGAAGAAAATTATCAGTTGCAGCTGGCCTTGGCTCTCAGGCTTTCTTCAGAGGCCACTTGTGCCGATGATCCCAACTTTATGGATCTGATGCCAGACGAGGCAGCTTCAAGATCGTTGTCAAGTTCAGCTGAGGCTATCTCGCATCGATTTTGGGTAAATGGATGCATGTCATATTTTGACAAGGTGCCAGATGGTTTGTACCTAATTCATGGGATGGACCCTTATGTATGGTCTTTATGCACCAATCTGAAAGAGGATGGGCGTATACCATCATTTGAATCTCTGAAGACAGTTGACTTCAGCATCCGTTCATCAATTGAAGTAGTTTTCATAGATCGGCATAGTGATGCTAGCCTAAAGGAACTGCAAAACAGGGTGTATAATATTTCTTCTAGCTGTATAACGACAGAAGAGGTTGCGGATCATTTAGCAAAGCTGGTATGCAATCATATGGGGGGTTCAGTTTCTGAGGGAGAAGATGCCTTAGTTCCCTCCTGGAGGGAATGCAGCGATGACTTAAAAGAATGTTTGGGATCTGTTGTGATTCCCTTGTGCAGCTTATCTGTTGGCCTTTGCAGGCATCGTGCTCTTTTATTCAAAGTGCTAGCAGATTCAATTGATTTGCCTTGTCGAATTGCCAGGGGCTGTAAATATTGCACTAGAGATGATGCTTCATCTTGCCTTGTTAGGTTTGGTCTTGATAGGGAATATGTCATTGATCTGATTGGGAAGCCTGGTTGCTTATGCGAACCTGATTGTTTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCGTTGCGATTTCCAAGACTAAAACCTATTGAATCTAACATTGATTTCAGGTCACTGGCCAAACAGTATTTCTTGGATAGTCAATCACTTAATATTGTATTTGATGAAGCTTCTTCAGGGAATGTTGTATCTGGGAAGGATGCTGCATGCTCTGTCTATGAAAGGCCATTCAACAGGAAGGATGTACATGGAAAAAACATAGTGCTTGCTGGTGACAGGGATAGAAGTCCTCAATTAATGAATCCAAAAGTTACTCAACGGAATGCTCAAGATGGAAAGTCTGAGCAATTTAGATCATGTGATTCTACTGCTCAGCATAGTGTACAGTCTACCTCTTTTGTAGAAAATGTGGTTTGTTTAAACCAGATCTCACAGATTGATTCCAGAGATTCTGAGCCTCTCTTAGCACTGCCCTGTCTAAGGATGGATCCTGCTAATAATTTATCATTCATTGATGGTAATCGGCTGGTTAAAAAACCGAATCAGCTTTCCTTTGGCATAGAAGATTTTGTTATTCCATGGAATGATCTTGTTTTGAGGGAGAAAATTGGAGCAGGTTCTTTTGGGACAGTGTATCATGCTGATTGGCACGGCTCAGATGTTGCGGTGAAGATTCTGATGGAACAAGACCTTAATGCAGAACGGTTCGAGGAATTTCTTAGGGAGGTTGCCATAATGAAATCTCTACGACATCCGAACATTGTTCTTTTTATGGGTGCAGTCACTGAGCCTCCAAACTTGTCCATTGTCACGGAATACTTATCAAGAGGGAGTTTGCACAGGCTTTTGCATAGACCTGGGGCACGAGAAGTCTTAGATGAGAGACGTCGGTTAAACATGGCACATGATGTTGCAAAAGGGATGAATTATCTTCACAAACGTAATCCCCCAATTGTTCATCGTGATTTGAAATCTCCAAATATTTTGGTTGATAAGAAGTACACAGTAAAGATTTGTGATTTTGGGCTTTCACGCTTGAAGGCGCACACATTTCTTTCATCAAAATCAGCTGCTGGGACTGTTGTGGCCGCCGTGGGTTTCAAAGGCAAAAGGCTTGAGATCCCATGTGATTTCAATCCTCAAGTTGCTACTATTATAGAGGCTTGCTTCGCCAGCGAGCCCTGGAAACGTCCATCCTTTTATGAAATAATGGAAGCATTGAAGCCATTGATCAAACCAGCTACACCTAATCAAGTTCGCCCAAACATGTCATTAGTTACTCAATGA 2427 43.22 MEMPGRRSDYTFLSQIPDEEVGTGPSTSFFGSIAAEANISKGRTDRVFDWDGSGDHKLNTQANRIGNQYSWIGLQRHSSGSSYDDSSLASDYYAPTLSNAAANEINALGYIHDDEFRVKAVGNGGSSGKSWAQQTEENYQLQLALALRLSSEATCADDPNFMDLMPDEAASRSLSSSAEAISHRFWVNGCMSYFDKVPDGLYLIHGMDPYVWSLCTNLKEDGRIPSFESLKTVDFSIRSSIEVVFIDRHSDASLKELQNRVYNISSSCITTEEVADHLAKLVCNHMGGSVSEGEDALVPSWRECSDDLKECLGSVVIPLCSLSVGLCRHRALLFKVLADSIDLPCRIARGCKYCTRDDASSCLVRFGLDREYVIDLIGKPGCLCEPDCLLNGPSSISISSPLRFPRLKPIESNIDFRSLAKQYFLDSQSLNIVFDEASSGNVVSGKDAACSVYERPFNRKDVHGKNIVLAGDRDRSPQLMNPKVTQRNAQDGKSEQFRSCDSTAQHSVQSTSFVENVVCLNQISQIDSRDSEPLLALPCLRMDPANNLSFIDGNRLVKKPNQLSFGIEDFVIPWNDLVLREKIGAGSFGTVYHADWHGSDVAVKILMEQDLNAERFEEFLREVAIMKSLRHPNIVLFMGAVTEPPNLSIVTEYLSRGSLHRLLHRPGAREVLDERRRLNMAHDVAKGMNYLHKRNPPIVHRDLKSPNILVDKKYTVKICDFGLSRLKAHTFLSSKSAAGTVVAAVGFKGKRLEIPCDFNPQVATIIEACFASEPWKRPSFYEIMEALKPLIKPATPNQVRPNMSLVTQ 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1584095 1592118 + Cp4.1LG10g04220.1 Cpe10g00265 475802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00265 808 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Cpe10g00265 808 CDD STKc_MAP3K-like 583 787 - -
Cpe10g00265 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Cpe10g00265 808 SMART serkin_6 577 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00265 808 ProSiteProfiles Protein kinase domain profile. 577 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00265 808 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 119 740 - -
Cpe10g00265 808 MobiDBLite consensus disorder prediction 473 501 - -
Cpe10g00265 808 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 740 798 - -
Cpe10g00265 808 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 119 740 - -
Cpe10g00265 808 Gene3D Phosphorylase Kinase; domain 1 571 655 - -
Cpe10g00265 808 Pfam Protein tyrosine and serine/threonine kinase 578 729 IPR001245 GO:0004672|GO:0006468
Cpe10g00265 808 Pfam Ethylene-responsive protein kinase Le-CTR1 178 384 - -
Cpe10g00265 808 SUPERFAMILY Protein kinase-like (PK-like) 558 786 IPR011009 -
Cpe10g00265 808 Gene3D Transferase(Phosphotransferase) domain 1 656 741 - -
Cpe10g00265 808 Gene3D Transferase(Phosphotransferase) domain 1 742 800 - -
Cpe10g00265 808 MobiDBLite consensus disorder prediction 479 501 - -
Cpe10g00265 808 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 740 798 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00237 Cpe10g00265 CCT
Cpe08g01046 Cpe10g00265 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00265 Cpe-Chr10:1584095 Cpe20g00145 Cpe-Chr20:821271 7.21E-39 dispersed
Cpe10g00265 Cpe-Chr10:1584095 Cpe03g00237 Cpe-Chr3:1177932 0 wgd
Cpe10g00265 Cpe-Chr10:1584095 Cpe08g01046 Cpe-Chr8:7996171 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62642 PF14381 EDR1 1.20E-78 CL0125 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00265 K14510 - csv:101208800 1359.36