Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00271 | ATGGGAACTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATCAAACCTGTTCAAAGTAAGGTAGGATCTCATCATTCAGATTTCTTATCAAATAAAGATCGAAAACTTTCTGCATTGAAAATTGGATTCAAAGGATCTCTAGAGGATGATATCAATCAGATTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGCTTAGGTCATTCGCAAGTAGAGGTAAATGCACTGAGAAAAAGTACACTAAAGAAGCCGATCACTGTTGGCATACCTCGCTCACCAGGTATTGGTACTTCCGATTCTGGTAGTCTGAAGCAAGCACTTAGGGAACTATGTGTTTCAAAAGCGTCTGAAATGGCTGCTATGAAGAGAGCATCAAAATTGTCTAGCTCTTCAAGAATCTCCGAAGCTGGGCGGATCAAGACATTGTACAATTCAGTTATGGTTGAAGCTACTGAGTCAGGCTCTTCTTCAAGCGTGGTTGAAATATCTCTGGTTCCAGAGGAAAAGAAATTGAACTTCGAGAAGAGACTTGAGCATGTCCAGGCATCTGCTGTTAAATCTCCGGTTGAAAGTGCTCGTCCCTTTCAGTTGCCTGTTGCCAAAACGAAAAATTATAGCGAGGTTGTTACTGTGGAACAAAACGTCAATACCACGTCGTCAAGGAAAGTTGGATCTCAAACATTAAGGGCAGAGCTGGAGAAGGAAGAGGAGTCCGTTACCCCACCATCGTTATCTTCCTGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAATTCTTGCTGGAAGCAGGGTAGCAGATAAAGCGGCATTGTCCAAGGCAGGACGAAAAGGTAGGATGCAAACTGCATCTTCGTCTAAGTTGGGTAGTGGCAATAAGGTTACCAAGTTATCTAGAAGTGCCTCCCGTTCGGTTAAACCCGTTATTAGGAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGATGATACGGATCCTAGTAATAGGAAGTTGATATGTGCGCGATGCCACTGTGCATTGAATGGTGCAGCTAAAGACTCAATGAAGGGCTCTGCATCCCAGTTTAGTGGTCTTGGCACTGGTGTAAGCATGACGAATTCAAAATCAGGCGTTAGCAAATCAGGCATCTACGGGGATGGCAAGGCTTCTGATGTTAGAGTAAAAAGAAATACAAGGGCACGGGATAAGGGCGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGATTACAGTAGCAGTACGACGAGTATTATAAGTGATGACAGCAATGGTCGTGGATCCAGTAATGGTAACAGACCTCATATGTCGAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGGAGCATGGGGTCCTCAGCTTGCGGCATTTCAATCTTTTAAAGAAGCTTGGTTGTGGTGACATCGGAACCGTGTATCTAGCTGAGCTAACTGGCACTAGTTGCTTATTTGCCATCAAGGTCATGGACAATGAGTTTCTAGCAAGACGGAAGAAAATGCCGAGAGCGCAAACTGAGAGAGAAATACTTAGAATGCTAGATCATCCCTTCCTTCCAACACTTTATGTTCAATTTACTTCTGATAATTTATCATGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTTAGGCAGAAGCAGCTAAGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGCGTTATTTATCGAGATTTAAAACCCGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTAGGTGCACGGTCAGTCCAACGCTCCTGAAGTCATCATCCTTCAATGCAGACTTGGTGAAAACCTCAGTTCCAGGTAGAGATTCTAGTTGTGTTGAGCCATTTTGCATTGGACCATCATGTCAAGTCCCATGCTTCAGCCCCAGGTTCTTACCTGCTACAGCCAAAGCAAGGAAGTCAAAACCTGACCTCACAACACAGTTCAGGTCATTGCCCCAGCTCATTGCCGAACCGACCGATGCACGATCAAATTCCTTCGTTGGCACTCACGAATATTTGGCTCCCGAGATCATTAAAGGAGAGGGTCATGGAGCTGCAGTCGATTGGTGGACGTTTGGTGTTTTTCTATATGAGCTTCTATATGGTAGAACCCCATTCAAGGGTTCAAACAATGAAGAAACATTAACCAATGTAATCATTCAGAGCCTCAGTTTTCCCGACAGCCCGATCGTTAGTTTCCAAGCAAGAGATCTTATCCGAGGACTGTTGATAAAAGAACCCGAAAATCGATTCGGGACAGAGAAAGGGGCTGCAGAAATCAAACAGCACCCATTCTTCGAGGGTCTAAACTGGGCATTGATCCGTTGTGCAATCCCTCCAGAACTTCCTGACTTATGTGATATGGACATTACAAGCATGATTACTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCCACTGGAGAACACCTCGAGTTCGAACTGTTTTAG | 2586 | 43.74 | MGTGTCEIVEAREEIKPVQSKVGSHHSDFLSNKDRKLSALKIGFKGSLEDDINQIFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGTSDSGSLKQALRELCVSKASEMAAMKRASKLSSSSRISEAGRIKTLYNSVMVEATESGSSSSVVEISLVPEEKKLNFEKRLEHVQASAVKSPVESARPFQLPVAKTKNYSEVVTVEQNVNTTSSRKVGSQTLRAELEKEEESVTPPSLSSCTIGKVLEKEKKILAGSRVADKAALSKAGRKGRMQTASSSKLGSGNKVTKLSRSASRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNDDTDPSNRKLICARCHCALNGAAKDSMKGSASQFSGLGTGVSMTNSKSGVSKSGIYGDGKASDVRVKRNTRARDKGEFSQSSKSSQGDYSSSTTSIISDDSNGRGSSNGNRPHMSKDVRWEAIRHAQLEHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTSCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLSRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSSSFNADLVKTSVPGRDSSCVEPFCIGPSCQVPCFSPRFLPATAKARKSKPDLTTQFRSLPQLIAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLTNVIIQSLSFPDSPIVSFQARDLIRGLLIKEPENRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCDMDITSMITQQNKFRYLESKSTGEHLEFELF | 861 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1615268 | 1619211 | - | Cp4.1LG10g04130.1 | Cpe10g00271 | 475808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 400 | 417 | - | - | |
Cpe10g00271 | 861 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 3 | 861 | - | - | |
Cpe10g00271 | 861 | Pfam | Protein kinase domain | 478 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00271 | 861 | Pfam | Protein kinase domain | 707 | 810 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00271 | 861 | ProSiteProfiles | Protein kinase domain profile. | 477 | 810 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00271 | 861 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 598 | 610 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe10g00271 | 861 | Gene3D | Phosphorylase Kinase; domain 1 | 475 | 556 | - | - | |
Cpe10g00271 | 861 | SUPERFAMILY | Protein kinase-like (PK-like) | 452 | 830 | IPR011009 | - | |
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 273 | 342 | - | - | |
Cpe10g00271 | 861 | SMART | serkin_6 | 477 | 810 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 280 | 307 | - | - | |
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 418 | 452 | - | - | |
Cpe10g00271 | 861 | CDD | STKc_phototropin_like | 475 | 831 | - | - | |
Cpe10g00271 | 861 | Gene3D | Transferase(Phosphotransferase) domain 1 | 703 | 828 | - | - | |
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 377 | 453 | - | - | |
Cpe10g00271 | 861 | Gene3D | Transferase(Phosphotransferase) domain 1 | 557 | 626 | - | - | |
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 324 | 342 | - | - | |
Cpe10g00271 | 861 | MobiDBLite | consensus disorder prediction | 377 | 391 | - | - | |
Cpe10g00271 | 861 | PANTHER | FLIPPASE KINASE 1-RELATED | 3 | 861 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00421 | Cpe-Chr5:2400344 | Cpe10g00271 | Cpe-Chr10:1615268 | 0 | dispersed | |
Cpe10g00271 | Cpe-Chr10:1615268 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe17g01122 | Cpe-Chr17:8500899 | Cpe10g00271 | Cpe-Chr10:1615268 | 3.70E-71 | dispersed | |
Cpe18g00818 | Cpe-Chr18:7606159 | Cpe10g00271 | Cpe-Chr10:1615268 | 2.64E-08 | dispersed | |
Cpe10g00271 | Cpe-Chr10:1615268 | Cpe16g00796 | Cpe-Chr16:7783762 | 0 | wgd | |
Cpe10g00271 | Cpe-Chr10:1615268 | Cpe19g00458 | Cpe-Chr19:4046135 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62643 | PF00069 | Pkinase | 6.50E-36 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00271 | - | K08286 | csv:101210027 | 1459.12 |