Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00271 ATGGGAACTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATCAAACCTGTTCAAAGTAAGGTAGGATCTCATCATTCAGATTTCTTATCAAATAAAGATCGAAAACTTTCTGCATTGAAAATTGGATTCAAAGGATCTCTAGAGGATGATATCAATCAGATTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGCTTAGGTCATTCGCAAGTAGAGGTAAATGCACTGAGAAAAAGTACACTAAAGAAGCCGATCACTGTTGGCATACCTCGCTCACCAGGTATTGGTACTTCCGATTCTGGTAGTCTGAAGCAAGCACTTAGGGAACTATGTGTTTCAAAAGCGTCTGAAATGGCTGCTATGAAGAGAGCATCAAAATTGTCTAGCTCTTCAAGAATCTCCGAAGCTGGGCGGATCAAGACATTGTACAATTCAGTTATGGTTGAAGCTACTGAGTCAGGCTCTTCTTCAAGCGTGGTTGAAATATCTCTGGTTCCAGAGGAAAAGAAATTGAACTTCGAGAAGAGACTTGAGCATGTCCAGGCATCTGCTGTTAAATCTCCGGTTGAAAGTGCTCGTCCCTTTCAGTTGCCTGTTGCCAAAACGAAAAATTATAGCGAGGTTGTTACTGTGGAACAAAACGTCAATACCACGTCGTCAAGGAAAGTTGGATCTCAAACATTAAGGGCAGAGCTGGAGAAGGAAGAGGAGTCCGTTACCCCACCATCGTTATCTTCCTGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAATTCTTGCTGGAAGCAGGGTAGCAGATAAAGCGGCATTGTCCAAGGCAGGACGAAAAGGTAGGATGCAAACTGCATCTTCGTCTAAGTTGGGTAGTGGCAATAAGGTTACCAAGTTATCTAGAAGTGCCTCCCGTTCGGTTAAACCCGTTATTAGGAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGATGATACGGATCCTAGTAATAGGAAGTTGATATGTGCGCGATGCCACTGTGCATTGAATGGTGCAGCTAAAGACTCAATGAAGGGCTCTGCATCCCAGTTTAGTGGTCTTGGCACTGGTGTAAGCATGACGAATTCAAAATCAGGCGTTAGCAAATCAGGCATCTACGGGGATGGCAAGGCTTCTGATGTTAGAGTAAAAAGAAATACAAGGGCACGGGATAAGGGCGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGATTACAGTAGCAGTACGACGAGTATTATAAGTGATGACAGCAATGGTCGTGGATCCAGTAATGGTAACAGACCTCATATGTCGAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGGAGCATGGGGTCCTCAGCTTGCGGCATTTCAATCTTTTAAAGAAGCTTGGTTGTGGTGACATCGGAACCGTGTATCTAGCTGAGCTAACTGGCACTAGTTGCTTATTTGCCATCAAGGTCATGGACAATGAGTTTCTAGCAAGACGGAAGAAAATGCCGAGAGCGCAAACTGAGAGAGAAATACTTAGAATGCTAGATCATCCCTTCCTTCCAACACTTTATGTTCAATTTACTTCTGATAATTTATCATGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTTAGGCAGAAGCAGCTAAGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGCGTTATTTATCGAGATTTAAAACCCGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTAGGTGCACGGTCAGTCCAACGCTCCTGAAGTCATCATCCTTCAATGCAGACTTGGTGAAAACCTCAGTTCCAGGTAGAGATTCTAGTTGTGTTGAGCCATTTTGCATTGGACCATCATGTCAAGTCCCATGCTTCAGCCCCAGGTTCTTACCTGCTACAGCCAAAGCAAGGAAGTCAAAACCTGACCTCACAACACAGTTCAGGTCATTGCCCCAGCTCATTGCCGAACCGACCGATGCACGATCAAATTCCTTCGTTGGCACTCACGAATATTTGGCTCCCGAGATCATTAAAGGAGAGGGTCATGGAGCTGCAGTCGATTGGTGGACGTTTGGTGTTTTTCTATATGAGCTTCTATATGGTAGAACCCCATTCAAGGGTTCAAACAATGAAGAAACATTAACCAATGTAATCATTCAGAGCCTCAGTTTTCCCGACAGCCCGATCGTTAGTTTCCAAGCAAGAGATCTTATCCGAGGACTGTTGATAAAAGAACCCGAAAATCGATTCGGGACAGAGAAAGGGGCTGCAGAAATCAAACAGCACCCATTCTTCGAGGGTCTAAACTGGGCATTGATCCGTTGTGCAATCCCTCCAGAACTTCCTGACTTATGTGATATGGACATTACAAGCATGATTACTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCCACTGGAGAACACCTCGAGTTCGAACTGTTTTAG 2586 43.74 MGTGTCEIVEAREEIKPVQSKVGSHHSDFLSNKDRKLSALKIGFKGSLEDDINQIFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGTSDSGSLKQALRELCVSKASEMAAMKRASKLSSSSRISEAGRIKTLYNSVMVEATESGSSSSVVEISLVPEEKKLNFEKRLEHVQASAVKSPVESARPFQLPVAKTKNYSEVVTVEQNVNTTSSRKVGSQTLRAELEKEEESVTPPSLSSCTIGKVLEKEKKILAGSRVADKAALSKAGRKGRMQTASSSKLGSGNKVTKLSRSASRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNDDTDPSNRKLICARCHCALNGAAKDSMKGSASQFSGLGTGVSMTNSKSGVSKSGIYGDGKASDVRVKRNTRARDKGEFSQSSKSSQGDYSSSTTSIISDDSNGRGSSNGNRPHMSKDVRWEAIRHAQLEHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTSCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLSRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSSSFNADLVKTSVPGRDSSCVEPFCIGPSCQVPCFSPRFLPATAKARKSKPDLTTQFRSLPQLIAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLTNVIIQSLSFPDSPIVSFQARDLIRGLLIKEPENRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCDMDITSMITQQNKFRYLESKSTGEHLEFELF 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1615268 1619211 - Cp4.1LG10g04130.1 Cpe10g00271 475808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00271 861 MobiDBLite consensus disorder prediction 400 417 - -
Cpe10g00271 861 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 861 - -
Cpe10g00271 861 Pfam Protein kinase domain 478 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00271 861 Pfam Protein kinase domain 707 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00271 861 ProSiteProfiles Protein kinase domain profile. 477 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00271 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Cpe10g00271 861 Gene3D Phosphorylase Kinase; domain 1 475 556 - -
Cpe10g00271 861 SUPERFAMILY Protein kinase-like (PK-like) 452 830 IPR011009 -
Cpe10g00271 861 MobiDBLite consensus disorder prediction 273 342 - -
Cpe10g00271 861 SMART serkin_6 477 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00271 861 MobiDBLite consensus disorder prediction 280 307 - -
Cpe10g00271 861 MobiDBLite consensus disorder prediction 418 452 - -
Cpe10g00271 861 CDD STKc_phototropin_like 475 831 - -
Cpe10g00271 861 Gene3D Transferase(Phosphotransferase) domain 1 703 828 - -
Cpe10g00271 861 MobiDBLite consensus disorder prediction 377 453 - -
Cpe10g00271 861 Gene3D Transferase(Phosphotransferase) domain 1 557 626 - -
Cpe10g00271 861 MobiDBLite consensus disorder prediction 324 342 - -
Cpe10g00271 861 MobiDBLite consensus disorder prediction 377 391 - -
Cpe10g00271 861 PANTHER FLIPPASE KINASE 1-RELATED 3 861 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00421 Cpe-Chr5:2400344 Cpe10g00271 Cpe-Chr10:1615268 0 dispersed
Cpe10g00271 Cpe-Chr10:1615268 Cpe10g01239 Cpe-Chr10:9546367 0 dispersed
Cpe17g01122 Cpe-Chr17:8500899 Cpe10g00271 Cpe-Chr10:1615268 3.70E-71 dispersed
Cpe18g00818 Cpe-Chr18:7606159 Cpe10g00271 Cpe-Chr10:1615268 2.64E-08 dispersed
Cpe10g00271 Cpe-Chr10:1615268 Cpe16g00796 Cpe-Chr16:7783762 0 wgd
Cpe10g00271 Cpe-Chr10:1615268 Cpe19g00458 Cpe-Chr19:4046135 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62643 PF00069 Pkinase 6.50E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00271 - K08286 csv:101210027 1459.12