Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00277 | ATGGCGGAAGAGCACCGATGCCAAGCACCTGAAGGCCACCGTCTCTGCGCCAATAATTGCGGCTTCTTCGGTAGCCCAGCTACCATGGATCTCTGCTCCAAATGTTACAGAGACATCCGCCTTAAAGAACAAGAACAAGCCTCCACCAAATCCACCATCGAAGCCGCTCTCTCGGCCTCATCATCTCCTTCACCCTCCTCTTCCTCAATCGATCCTCCTCCCGTTCCTCCTGTTGTCGCCGAGTCCTCGCCGGACGCCACCACAGAACTGACCATCCCCGCCCTTGCGGCGGTCGGATCTGAGGCTACGAACCAACCGAACCCGAACCCGAACCGTTGTTCATCGTGCCGTAAGAAGGTGGGTTTGACCGGGTTCAGATGCAGATGCGGAACTACCTTCTGTGGGGCTCATAGGTACCCGGAGAAACACGGGTGCACCTTCGATTTCAAGTCAATCGGAAGGGAGGAGATCGCTAGAGCGAACCCCATCGTCAAAGCCGATAAACTGGAGAGGATTTGA | 519 | 56.07 | MAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDIRLKEQEQASTKSTIEAALSASSSPSPSSSSIDPPPVPPVVAESSPDATTELTIPALAAVGSEATNQPNPNPNRCSSCRKKVGLTGFRCRCGTTFCGAHRYPEKHGCTFDFKSIGREEIARANPIVKADKLERI | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1643495 | 1644013 | + | Cp4.1LG10g04270.1 | Cpe10g00277 | 475814 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00277 | 172 | SMART | A20_3 | 13 | 37 | IPR002653 | GO:0003677|GO:0008270 | |
Cpe10g00277 | 172 | Pfam | AN1-like Zinc finger | 113 | 149 | IPR000058 | GO:0008270 | |
Cpe10g00277 | 172 | PANTHER | BNAC06G14100D PROTEIN | 1 | 172 | - | - | |
Cpe10g00277 | 172 | MobiDBLite | consensus disorder prediction | 46 | 86 | - | - | |
Cpe10g00277 | 172 | Pfam | A20-like zinc finger | 14 | 37 | IPR002653 | GO:0003677|GO:0008270 | |
Cpe10g00277 | 172 | ProSiteProfiles | Zinc finger A20-type profile. | 10 | 44 | IPR002653 | GO:0003677|GO:0008270 | |
Cpe10g00277 | 172 | SMART | AN1_Zf_4 | 113 | 150 | IPR000058 | GO:0008270 | |
Cpe10g00277 | 172 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 15 | 58 | - | - | |
Cpe10g00277 | 172 | MobiDBLite | consensus disorder prediction | 48 | 66 | - | - | |
Cpe10g00277 | 172 | Gene3D | - | 1 | 71 | - | - | |
Cpe10g00277 | 172 | Gene3D | - | 91 | 168 | IPR035896 | - | |
Cpe10g00277 | 172 | SUPERFAMILY | AN1-like Zinc finger | 103 | 167 | IPR035896 | - | |
Cpe10g00277 | 172 | ProSiteProfiles | Zinc finger AN1-type profile. | 107 | 153 | IPR000058 | GO:0008270 | |
Cpe10g00277 | 172 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 172 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00277 | Cpe-Chr10:1643495 | Cpe16g00809 | Cpe-Chr16:7859759 | 1.80E-58 | dispersed | |
Cpe10g00277 | Cpe-Chr10:1643495 | Cpe19g00465 | Cpe-Chr19:4108060 | 4.59E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00277 | - | - | csv:101211758 | 293.893 |