Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00333 ATGGCGACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCAGGCGCGAGATCGGCCGACCTGAGCTCTAAAATCAACGCCGCCCCTTCTGTTGCATCTCCTGGGGTTGTGGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGACGGAAGGAGGTCTGCGCTTCTGTACCTTGGTGCCACCCTCTTTGCTGCGGCTGCGGCTGCCTCCAACTCCTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACCGTTCAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 516 49.03 MATMNSSVLACNYAISGARSADLSSKINAAPSVASPGVVGYKLPAIRAQQARVPEAKNDGRRSALLYLGATLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1941409 1943009 + Cp4.1LG10g03660.1 Cpe10g00333 475870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00333 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 - -
Cpe10g00333 171 Gene3D - 87 171 IPR044907 -
Cpe10g00333 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 171 IPR008796 GO:0009522|GO:0015979
Cpe10g00333 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00333 Cpe-Chr10:1941409 Cpe19g00524 Cpe-Chr19:4454144 6.42E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00333 K02701 - csv:101204396 298.901