Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00335 ATGCCGGCTTGGTGGGTAAGAAAATCGAGTAAAAACAAGGACCATCACAATCATCCCACTACCTTTCTCAACTTCTTCAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCCAAAACTGAACCTAAGAACGCCAGCGACAAACCCAGGAGCTTCGATGAGGTCTCTCCGGTGATTTTCTCTCGCAATTCCCCCAGGTGTAGCAGGGATCTGGGCACTTCTGGTGCCGCCTCTTCTGGGTTTTCCGGTTTTGACTCCGATAGTGGAGATACCAGTGTTCCTCTTCCTCGACCTACTACTTCCGGCCTTGGGATTGATCATGGAGTCGGGAATGGATCTGGGTCTGTTTCGGTTTCAAGTGTTAGCTCCTCTGGCTCTTCCGATGATCATCCATCTGCTCAAGAACACCTTCAATTTGGAGGTCTCAGAGGATTTGCTGATACAAGAACAGAGAAAAGGCCAAGAAGTCCAGGTCCAGGATCAAGAGGACCCACCAGTCCTACATCGCCTCTCAACCCGCGGTTCTGTGGCATGAGTTTGGAGTCTCCTACAGGCAAGCTAGATGACGGGATGAGTCGATGTCACAAGCTGCCACTACCTCCAAGTTCTCCCACCAGCCCGTCTTCCTTGACCAGCACGAGAGCTATCAATATCGGCGATAACAACGTTGCTACACAACCGAAGTGGAAGAAAGGAAGGCTTCTAGGAAGGGGAACATTTGGGCACGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATCAAGGAGGTCAGGGTTATAAGCGATGATTCGACATCGAAGGAATGTCTCAAGCAATTGAACCAGGAGATTACCGTGCTCAGTCAGCTGTCGCATCCAAACATCGTCCGGTACTATGGTAGTGAAATGGGTGACGAGTCCCTCTCGGTCTATTTAGAATACGTCTCTGGTGGCTCAATTCACAAGTTACTTCAGGAATACGGTGCCTTCAAAGAACCTGTCGTAAGAAACTATACCCGAAAGATCCTTTCCGGGCTTGCTTATCTGCACGGGAGAAACACAGTGCATAGGGACATAAAAGGGGCAAATATCTTAGTCGATCCGAACGGCCAGGTCAAGTTGGTGGACTTTGGCATGGCTAAACATATTACGAATTGTACTTCGATGCTCTCCTTCAAAGGTAGTCCTTATTGGATGGCCCCCGAGGTTGTAATGAATACAAATGGCTACAGTCTTGCTGTAGACATTTGGAGTTTAGGGTGTACAGTTCTTGAAATGGCGACGTCCAAACCGCCTTGGAGCAAATACGAAGGGGTGGCTGCCATTTTCAAAATTGGGAATAGTAAAGACATTCCAGAAATTCCAGACCATCTCTCGAATGATGCTAAAAGTTTCGTGCAATTATGCTTGCAACGGGACCCGGCTGCACGTCCTTCGGCTGCAGAACTACTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGAGCGTCCGATGTTAACTTGTCCATGGATGCATTCCTGTTTAGTTTCGATGGAAGCCAGACTCCGCCATTGTTAGATCGGCATCCAAACCGAAAAAGTATAAGCATATGCGATGGAGATTATGCAACAAACCCAACAATCTCTTCCAGAGCTTCGAGGAGTCCTAGGGGAAACGCAAGATTGATCACATCCTTGCCTGTCTCTCCTAGTTCAAGTCCATTACGGTCGTATGGCCCCGCACACCAGAGCTGTTATCTTTCACCACCACACACATCTTACATGGGGTTGGGTCAAAGCGGATACAATTTAAACGAATATGCATATAACACAAGACCGAACACATTGTTCACCCTTGATCCATCACGAGAGTCGTTACTATTGAAAGTTCGGACTCACGGCGGATCACCAAGAAGACCTCTATGA 1905 47.61 MPAWWVRKSSKNKDHHNHPTTFLNFFNSSSSSSSSSSSSSPKTEPKNASDKPRSFDEVSPVIFSRNSPRCSRDLGTSGAASSGFSGFDSDSGDTSVPLPRPTTSGLGIDHGVGNGSGSVSVSSVSSSGSSDDHPSAQEHLQFGGLRGFADTRTEKRPRSPGPGSRGPTSPTSPLNPRFCGMSLESPTGKLDDGMSRCHKLPLPPSSPTSPSSLTSTRAINIGDNNVATQPKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVRVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYVSGGSIHKLLQEYGAFKEPVVRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGQVKLVDFGMAKHITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDIPEIPDHLSNDAKSFVQLCLQRDPAARPSAAELLDHPFVQDAVTPRASDVNLSMDAFLFSFDGSQTPPLLDRHPNRKSISICDGDYATNPTISSRASRSPRGNARLITSLPVSPSSSPLRSYGPAHQSCYLSPPHTSYMGLGQSGYNLNEYAYNTRPNTLFTLDPSRESLLLKVRTHGGSPRRPL 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1945120 1950066 - Cp4.1LG10g03520.1 Cpe10g00335 475872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00335 634 ProSitePatterns Protein kinases ATP-binding region signature. 238 261 IPR017441 GO:0005524
Cpe10g00335 634 SMART serkin_6 232 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00335 634 Gene3D Transferase(Phosphotransferase) domain 1 228 505 - -
Cpe10g00335 634 ProSiteProfiles Protein kinase domain profile. 232 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00335 634 MobiDBLite consensus disorder prediction 1 193 - -
Cpe10g00335 634 CDD STKc_MEKK1_plant 231 488 - -
Cpe10g00335 634 Pfam Protein kinase domain 233 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00335 634 MobiDBLite consensus disorder prediction 60 101 - -
Cpe10g00335 634 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 611 - -
Cpe10g00335 634 SUPERFAMILY Protein kinase-like (PK-like) 231 577 IPR011009 -
Cpe10g00335 634 MobiDBLite consensus disorder prediction 19 45 - -
Cpe10g00335 634 MobiDBLite consensus disorder prediction 115 136 - -
Cpe10g00335 634 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 611 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00335 Cpe19g00525 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00647 Cpe-Chr5:3949716 Cpe10g00335 Cpe-Chr10:1945120 3.71E-138 dispersed
Cpe09g00079 Cpe-Chr9:464681 Cpe10g00335 Cpe-Chr10:1945120 8.27E-137 dispersed
Cpe10g00335 Cpe-Chr10:1945120 Cpe14g00100 Cpe-Chr14:541122 1.29E-143 dispersed
Cpe12g00214 Cpe-Chr12:1402800 Cpe10g00335 Cpe-Chr10:1945120 2.19E-89 dispersed
Cpe10g00335 Cpe-Chr10:1945120 Cpe19g00525 Cpe-Chr19:4459172 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62644 PF00069 Pkinase 6.30E-73 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00335 K04421 - csv:101203907 994.956