Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00425 ATGGGTTGGTTGCGCAATATCTCCTTTACTGCTTCCTCCATGGTGAGAATTCCGGCCACTGCCACCGGTGACCATTCCCCGACCAGAAAGGCTACTACCAGAGACTCCCACAATCATAGTTATCGGGGAGTTGTTTGGCGTTTTGGCGCCTCTAAACATTCCCGCCATAGGAAGCTTCGGAACTTGAGCGGACGTGAGCGTGCTGCTACTTCTTTGGCTAAATGGTCCGATACTACGCCCGAACCCGACTCCTTGTCGCGACTGTCGAGTACTTCTGATGAACATGCCGTGCCCTTGCCGCTCCCGGAGGTTCCCCCGATCTTTCAGCGTCGTGAAGGGATCTCGAATTCGAATTCTGCTTGTGGAGACGGGGATTGTCCTCTTCCGTCGCCCAAGGATTGGCATGGCCGAGGCGGGGACGACCGTGATGTAGATAGATGTAGAACTGCACCTCCTCTTAAGACTGGAGGCGGGGATTCCATTGGTACTCCGATTAAAAGTATATCTGATTCTGGGGAGAGGCAGAAGAAAGAAGATCAGATTGGGACAAGGTCGTCTGGGAGGGTGAATCAATATGCCAGACGCTTTCCTGAAGCATCTCAGAATAAATTTTGGATTGACGTTCCCTGTAGGAGTGCTCCTACTAGTCCTTTTGCAAGTCCTACACTCAGTCCCCAAAGAAATAGTTCCAGGAACCTTTCAAACTCCCGTCATGTGGCTCCATTAGAATATCAAGGCTGGTCTGCACCTGAGCTACCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCATTCTTTGATGGCTCCACTCTTAGCTCTGAGAGTTCTCCCATGCATAGCCCAACAGGTAGAAATCCCCACCAAGATCCCAGAAGTCCAACAGGAGCTTCATCTCCATTGCACACCAAGATTTCCCTTGAAACACATGCTCCGCGTCGTGAAGGTTCTGGTCCTGTCAGTGTCCACCCATTACCTCTTCCTCCTGGAGTACCAATGCCTTCATCGTCAATCTCAATGACTTCACCGTCAACCATAATGCCTTCACCATCAACCCCAACGCCTTCACCATCAACCCCAACGCCTCTACCATCAACCCCAATTACAGAAGCTAACACTAAAGCTGAGCCAATCTCAATGAAAAATCAATGGCGGAAAGGAAAACTTATTGGCCGGGGCACATTTGGAAGTGTTTATGTTGCAAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAATTATTTCACGATGATCCGAAGTCAGCTGAATGTATAAAGCAATTAGAACAGGAAATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGTAGTGATTTTGTTGAAGATCGATTATATATTTACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTTCGTGAACATTGTGGAGCCATGACAGAATCTGTTGTTCGAAGTTTTACTCGTCACATCCTCTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACATCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTTGGAATGGCTAAACATCTTACAGGACAAGTTGCTGATCTCTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTCCTTCTGTCTGTGATGCAGAAGGATAACAACTCTGATCTTGCCTTAGCTGTTGATATTTGGAGCCTTGGTTGCACTATTATAGAAATGTTCACTGGCAAGCCACCTTGGAGCGACTATGAAGGGGCTGCAGCTATGTTTAAGGTAATGAGAGACACCCCAACAATACCCGAATCATTATCATATGAAGCCAGAGATTTCTTAAAATGCTGCTTTCAGAGAAATCCTGCAGAGAGGTCGACTGCTGCCATGCTGCTTGAACATCCATTTATAAAAAACTTGCAACATCCAGATGCTCCACCTTGCTATCAGGCCATCGCTAGATCGAGTTTGATGGATAAATGCTACAGCCCAAGTAAACAATATTCGAGTAAACTTGATCAGTCTCCCATGCTTCCAAGCTCACAAAATTCCAAGGGAATGTTAGCGGCCGAGAGGCAAGAGTTGCTTTTTCCCTTGCTCTCCACTTCTCATTTTGATTTAAATCTCCAAATTAATGGGTTATTGGGTGTTGCAGCTGTTCTTGCTGCTATGACTGCTCCCAAAGCTGGCTTGATTTCTTGTGCTGTTCGGATGTGTGTGGGTGTTAGATGGTGA 2256 46.68 MGWLRNISFTASSMVRIPATATGDHSPTRKATTRDSHNHSYRGVVWRFGASKHSRHRKLRNLSGRERAATSLAKWSDTTPEPDSLSRLSSTSDEHAVPLPLPEVPPIFQRREGISNSNSACGDGDCPLPSPKDWHGRGGDDRDVDRCRTAPPLKTGGGDSIGTPIKSISDSGERQKKEDQIGTRSSGRVNQYARRFPEASQNKFWIDVPCRSAPTSPFASPTLSPQRNSSRNLSNSRHVAPLEYQGWSAPELPSSAMMRGVPPAFFDGSTLSSESSPMHSPTGRNPHQDPRSPTGASSPLHTKISLETHAPRREGSGPVSVHPLPLPPGVPMPSSSISMTSPSTIMPSPSTPTPSPSTPTPLPSTPITEANTKAEPISMKNQWRKGKLIGRGTFGSVYVASNRENGALCAMKEVELFHDDPKSAECIKQLEQEIKLLSQLKHPNIVQYYGSDFVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRSFTRHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPELLLSVMQKDNNSDLALAVDIWSLGCTIIEMFTGKPPWSDYEGAAAMFKVMRDTPTIPESLSYEARDFLKCCFQRNPAERSTAAMLLEHPFIKNLQHPDAPPCYQAIARSSLMDKCYSPSKQYSSKLDQSPMLPSSQNSKGMLAAERQELLFPLLSTSHFDLNLQINGLLGVAAVLAAMTAPKAGLISCAVRMCVGVRW 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2474215 2481135 + Cp4.1LG10g02640.1 Cpe10g00425 475962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00425 751 Gene3D Transferase(Phosphotransferase) domain 1 379 678 - -
Cpe10g00425 751 MobiDBLite consensus disorder prediction 259 369 - -
Cpe10g00425 751 ProSiteProfiles Protein kinase domain profile. 383 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00425 751 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Cpe10g00425 751 MobiDBLite consensus disorder prediction 72 93 - -
Cpe10g00425 751 SMART serkin_6 383 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00425 751 MobiDBLite consensus disorder prediction 134 149 - -
Cpe10g00425 751 MobiDBLite consensus disorder prediction 347 363 - -
Cpe10g00425 751 SUPERFAMILY Protein kinase-like (PK-like) 357 688 IPR011009 -
Cpe10g00425 751 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 696 - -
Cpe10g00425 751 MobiDBLite consensus disorder prediction 268 304 - -
Cpe10g00425 751 MobiDBLite consensus disorder prediction 57 191 - -
Cpe10g00425 751 MobiDBLite consensus disorder prediction 216 236 - -
Cpe10g00425 751 Pfam Protein kinase domain 384 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00425 751 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 696 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00425 Cpe-Chr10:2474215 Cpe14g00100 Cpe-Chr14:541122 1.62E-113 dispersed
Cpe17g00644 Cpe-Chr17:5236202 Cpe10g00425 Cpe-Chr10:2474215 3.44E-18 dispersed
Cpe10g00425 Cpe-Chr10:2474215 Cpe11g00172 Cpe-Chr11:933038 7.54E-160 wgd
Cpe10g00425 Cpe-Chr10:2474215 Cpe19g00606 Cpe-Chr19:4987930 0 wgd
Cpe10g00425 Cpe-Chr10:2474215 Cpe07g00458 Cpe-Chr7:2927007 4.01E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62648 PF00069 Pkinase 3.40E-67 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00425 - - cmax:111478157 1281.93