Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00441 ATGTCTGACCACAAATCAGGCTCCATGACCGACCAGCTCTCCAAGCAGACTTCTATTTTTGGCCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTAGGAGCAGCTTTTGTGCTCTTTCTGTTTCTTATTTCTCTTTGGATCGCCTCTAAACGCTCTCGCAAGAACATTTCTCACAAACCCACAATTCCAATCGTCTCCAAAGAAATCCAAGAGATCAGAATCGAGCAGCCCCTCGCTCAAAACCAAGAAAATAAGCCTAGTAGTAGAGCTCATTTTCAGGTCGAGCCGGAAGTAATCCCCGGAGTTGAGCGCCAAGCGTTGCTTTCGTTGCCTCAGGACGAAGAGCGAGTGAACAGGATTCATATTGAGATCGGGAAGGATCATAGGATTTCATATCCTGAGCGCCTAGGTCGGTCGTCTTCCTCGCACGGCAGTGGAGAGGGCCGATGTGGTGGTGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCCCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTCGAAGCTTCCACTAACGGCTTCGCCCCCGATAATGTAATCGGTGAGGGTGGGTATGGAATTGTTTATCATGGCATATTGGAGGATGGAACTCAGGTTGCTGTTAAGAATTTACTGAACAATAGGGGACAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGACGAGTCAGACACAAGAACCTAGTTAGATTACTTGGATACTGTGCTGAAGGTGCTCACAGGATGCTTGTATACGAGTACATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACCGCTAAAGGGCTAGCTTATCTTCACGAAGGATTGGAACCAAAGGTTGTTCACCGGGATATCAAATCAAGCAATATATTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCTAAGCTACTATGCTCTGATAATAGCTATATCACAACTCGAGTCATGGGAACATTTGGCTATGTAGCGCCAGAATATGCAAGTACGGGGATGCTAAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTCGTTATGGAAATAATCTCAGGAAGGAACCCTGTGGATTATGGTCGTCCTCCAGATGAGGTACACTTGATCGATTGGCTTAAGAGATTGGTTAGTAACCGTAACCCGGAGGGCGTATTGGATCCAAAGCTTTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTTCTTGTTGCATTACGCTGTGTGGACCCAAATGCTCAGAAGCGGCCAAAAATGGGACACATTATTCATATGCTTGAAGCTGAAGAGGCTACCTTAAAAGGGGATCGCAAAACTGGAAAGAACCCAGAGAACTCACATTCAGACAATGTCAAGGATGGTTTAAGTGAAAGGCAGGCGACAGAATTAGGTGAAACCAATGTGGATGAACAACGAGATACGTGA 1509 45.39 MSDHKSGSMTDQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKNISHKPTIPIVSKEIQEIRIEQPLAQNQENKPSSRAHFQVEPEVIPGVERQALLSLPQDEERVNRIHIEIGKDHRISYPERLGRSSSSHGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFAPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVDYGRPPDEVHLIDWLKRLVSNRNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEEATLKGDRKTGKNPENSHSDNVKDGLSERQATELGETNVDEQRDT 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2576118 2579652 - Cp4.1LG10g02380.1 Cpe10g00441 475978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00441 502 CDD STKc_IRAK 189 455 - -
Cpe10g00441 502 Gene3D Phosphorylase Kinase; domain 1 164 258 - -
Cpe10g00441 502 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00441 502 Pfam Protein kinase domain 186 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00441 502 PANTHER RECEPTOR-LIKE KINASE PLANT 1 495 - -
Cpe10g00441 502 PANTHER OS01G0323000 PROTEIN 1 495 - -
Cpe10g00441 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Cpe10g00441 502 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Cpe10g00441 502 ProSiteProfiles Protein kinase domain profile. 183 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00441 502 MobiDBLite consensus disorder prediction 461 502 - -
Cpe10g00441 502 SUPERFAMILY Protein kinase-like (PK-like) 164 455 IPR011009 -
Cpe10g00441 502 Gene3D Transferase(Phosphotransferase) domain 1 259 470 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00441 Cpe19g00628 CCT
Cpe10g00441 Cpe19g00628 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00538 Cpe-Chr8:3513694 Cpe10g00441 Cpe-Chr10:2576118 4.84E-170 dispersed
Cpe09g00068 Cpe-Chr9:401104 Cpe10g00441 Cpe-Chr10:2576118 5.37E-63 dispersed
Cpe10g00441 Cpe-Chr10:2576118 Cpe16g00727 Cpe-Chr16:7384870 0 dispersed
Cpe14g00085 Cpe-Chr14:464296 Cpe10g00441 Cpe-Chr10:2576118 4.87E-76 dispersed
Cpe10g00441 Cpe-Chr10:2576118 Cpe11g00144 Cpe-Chr11:786439 0 wgd
Cpe10g00441 Cpe-Chr10:2576118 Cpe19g00628 Cpe-Chr19:5107618 0 wgd
Cpe10g00441 Cpe-Chr10:2576118 Cpe07g00490 Cpe-Chr7:3199557 5.23E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62649 PF00069 Pkinase 1.20E-46 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00441 - - cmax:111497422 926.776