Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00444 | ATGTGGGATCTGAACGACTGCCCTGATGTGAGGGAGGGGGATGAATCCGAAGCCTGTTCCTCTGCCAAGACCTCCATCGAGGGAGACGGGGATGATGACAAACGGAAAAGGGTGGGATCGGCTTCCAATTCCAGTTGTTCGGCTGCGGAGGAGGAGGAGGAGGAGTTGGAGGAGGAAGAAGAGGAGGAGGAAGGATCCGATGAGGTATTGGGCTCCATGGTCATGCAAATTGACACACAAACCCCAAGCCCTGTAACTCGCCAGTTTTTCCCACTTGAAGACACTGAAATCCCACCTCCCCTTCCACTTCCAACTACCGATTCCGCCTTCCCTCGGGCTCACTGGGTTGGGGTCAAATTTGGCCATCCCGATCCTAATAATAACTCCATCAACCCCAATGACCTCTCCCACCCCATTAAGAAGAGCCGCAGAGGCCCAAGGTCTCGTAGCTCCCAGTATCGCGGGGTCACTTTCTACCGGAGAACCGGCCGCTGGGAGTCTCATATTTGGGATTGTGGAAAGCAGGTTTATCTCGGTGGATTCGATACGGCACATGCAGCTGCTCGTGCTTACGATAGAGCGGCCATTAAATTCCGAGGAGTGGAAGCGGACATAAACTTCAGCATCGAAGATTACGAGGACGACTTAAAACAGATGGGTAATCTAACAAAGGAGGAATTTGTGCATGTTCTTCGCCGACAAAGCACTGGGTTTCCCAGAGGAAGCTCCAAGTATAGAGGTGTAACGCTTCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAGAAGTATGTTTATCTGGGTTTGTTTGATACCGAGATCGAAGCCGCAAGGGCTTATGATAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCTGTCACCAATTTCGATCCCAGCATTTACGAGAGTGAGCTGAATCCGACAACTGACTCAACTAGCAATTTAGCAGACCACAGTCTTGATTTGAGTCTGGGAAATTCAAGCTCAAAGCAAAATGACAGCCCAAATGGTTCCTTAGATCCGCACCATTCTTCTTCAGCTCCTCTACCGATGGAAGCTGATTGGCAACGTAGTCAAGGATTTAGGCCTCCGCAGCTAAATTTGCTGCAAGAATCAAGCGGAGGAGGAGGTAGTGGAAACAAAAATTACAATAATGCACAGAGAGGAAACACTAATAGGTACCTGGAGAGAGAAACTATGCAGCTGCTAAGCCAAACACACATTCAATCTCCAATTTCCTTTGAAATGCAAAGACATGGGCAATTCAGGCGGCAGGCGAGTGGTGTAGATCAGCCCCACTCGCAGATATTGCTTCACAATCAAAATCATCCAACCTTCAATTATCAAATTCAGTTTCCGGGCAGCAGTAATGGAGGCCGAATAATAGGAAGTGATCTATCACTATCTCTAAGTGATCATCAGAATCAAGTTGTTGAATCGGGGCCATCGCAAGTTCTTGCAACTGCTGCAGCATCATCAGGATTCTCTCCCCAGATTAGACCTTCCAAGAATTGGCTGCACAAGAATGGGTTTCATTGTCTCATTAGACCCTCCTAA | 1569 | 48.37 | MWDLNDCPDVREGDESEACSSAKTSIEGDGDDDKRKRVGSASNSSCSAAEEEEEELEEEEEEEEGSDEVLGSMVMQIDTQTPSPVTRQFFPLEDTEIPPPLPLPTTDSAFPRAHWVGVKFGHPDPNNNSINPNDLSHPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSIEDYEDDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYESELNPTTDSTSNLADHSLDLSLGNSSSKQNDSPNGSLDPHHSSSAPLPMEADWQRSQGFRPPQLNLLQESSGGGGSGNKNYNNAQRGNTNRYLERETMQLLSQTHIQSPISFEMQRHGQFRRQASGVDQPHSQILLHNQNHPTFNYQIQFPGSSNGGRIIGSDLSLSLSDHQNQVVESGPSQVLATAAASSGFSPQIRPSKNWLHKNGFHCLIRPS | 522 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2595462 | 2601117 | - | Cp4.1LG10g02330.1 | Cpe10g00444 | 475981 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 369 | 392 | - | - | |
Cpe10g00444 | 522 | PANTHER | AP2 DOMAIN TRANSCRIPTION FACTOR | 1 | 520 | - | - | |
Cpe10g00444 | 522 | SMART | rav1_2 | 152 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | SMART | rav1_2 | 244 | 307 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | ProSiteProfiles | AP2/ERF domain profile. | 152 | 208 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | CDD | AP2 | 243 | 303 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | SUPERFAMILY | DNA-binding domain | 243 | 303 | IPR016177 | GO:0003677 | |
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cpe10g00444 | 522 | CDD | AP2 | 152 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | Gene3D | AP2/ERF domain | 243 | 302 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | Gene3D | AP2/ERF domain | 151 | 210 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 308 | 354 | - | - | |
Cpe10g00444 | 522 | Pfam | AP2 domain | 152 | 200 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | Pfam | AP2 domain | 243 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 308 | 347 | - | - | |
Cpe10g00444 | 522 | Coils | Coil | 42 | 69 | - | - | |
Cpe10g00444 | 522 | SUPERFAMILY | DNA-binding domain | 151 | 209 | IPR016177 | GO:0003677 | |
Cpe10g00444 | 522 | PRINTS | Ethylene responsive element binding protein signature | 245 | 256 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | PRINTS | Ethylene responsive element binding protein signature | 283 | 303 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | ProSiteProfiles | AP2/ERF domain profile. | 244 | 301 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 48 | 68 | - | - | |
Cpe10g00444 | 522 | MobiDBLite | consensus disorder prediction | 121 | 152 | - | - | |
Cpe10g00444 | 522 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 520 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00444 | Cpe19g00630 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g01126 | Cpe-Chr8:8455417 | Cpe10g00444 | Cpe-Chr10:2595462 | 6.45E-84 | dispersed | |
Cpe10g00444 | Cpe-Chr10:2595462 | Cpe16g00565 | Cpe-Chr16:6443669 | 2.78E-103 | dispersed | |
Cpe05g01156 | Cpe-Chr5:7851229 | Cpe10g00444 | Cpe-Chr10:2595462 | 6.04E-129 | transposed | |
Cpe10g00444 | Cpe-Chr10:2595462 | Cpe19g00630 | Cpe-Chr19:5121137 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50103 | PF00847 | AP2 | 3.60E-10 | CL0081 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00444 | K09284 | - | csv:101214724 | 679.093 |