Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cpe10g00446	ATGATTCCCAACCCACCCACATTCCTCCCAACCTTTCCACTTCTCTGTTGTGTTGTGCTGTGTTCTCTCTCCGCCTTTTCCGCCTCAGGATTTGCCTTTCAAATTCCGCCGCCTGCGCTTGTCCCACCGGAAGAATTGCGGTTGCCTTCCGACGCCGTTTCTCTTCTGTCCTTCAAGTCCAAAGCCGACTTGGACAACAAGCTTCTATACACTCTCAATGAGCGGTTTGACTACTGTCAATGGCAGGGCGTGAAGTGCGTCCAGGGTCGTGTTGTTAGATTGGTTCTTCAATCGTTTGGTCTCCGAGGGACATTGGCTCCAAATACAGTGTCTCAGCTCGACCAGCTTCGGATCCTCAGCCTGCATAACAACTCCCTCGAGGGACCCATTCCTGACCTATCCGGACTCTTCAACCTTAAATCTCTCTTCCTCGGCCGAAACTCCTTTGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTCGATCTTTCCTATAACAACTTCACGGGTCCGCTTCCGGTGAGGCTTTCCTCCTTGGACCGGCTCATTACTCTCCGGCTTGAATGGAATGGTTTCAATGGAAGTATTCCTCCATTAAACCAGTCCTTCCTTGAGGTCTTCAATGTCGCGGGGAATAACCTGACCGGGCAAATTCCAGTTACCCCCACACTGTCGCGTTTCAACACGTCGTCGTTTTTCTGGAACCCAGATCTCTGCGGCGAGATCGTCAACAAGGCATGCCACTCACGCGCTCCATTCTTTGAAGCTTCCAATGCTACTCCACCATCTCTCCCTTCCGACCAAAGCGCACAGTCACAGGACATACTTCTCTCTCCGGTCTCTCATGTTAAGCACAAGGAAACCGGTCTGATTGTGGGGCTTTCAGTCGGCGCCGCAGTTTTAATAGCAGGTCTTTTATGTTTCTATGTAGCTGCCAGAACCCAAAGAAAAACCGCGTCGAAGCCGGAAATTCCGCCATTCGAAACCGACACTGCGTTTTCCACAGCTTCCGCAATCAACGGCCGAGGCGACGGAAAGGGCGAACTTCAAGCCAAAATGAAAGAAATTGAAGATATACCTAAAGTCCAGAAGAGTGGTAGTCTTATATTTTGTGAAGGGGAGGCAGAGTTATTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCCGAGCTGCTCGGTAGAGGCACAATGGGAACTACGTACAAAGCAGTACTCTGCAACCAGCTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCGCGACGAGCAGCGAAGTTTTCGACCGGCATTTGGAAGCAGTAGGTGCGCTTCTTCACCCCAATTTGGTTCCAGTTAGGGCCTATTTCCAAGCCAGGGGAGAGAGATTAGTGGTCTACGATTACCAACCTAATGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCAAGGGCTAAGCCTCTGCACTGGACATCATGCTTAAAGATTGCAGAAGATTTAGCTCAGGGAATTGCTTATATACATCAAGCTTCTAAGTTAATCCATGGCAACTTAAAGTCTACTAATGTTCTCCTTGGAGCAGAGTTTGAGGCCTGTCTCACAGACTATGGGCTTTCTGCTCTGGCTGAGTGTTGTGAAGATCCTGATGGTTCACGCTACCAAGCCCCTGAAACTCGCAAGTCCAGCCGGAATGCCACTCACAAGAGCGACGTGTATGCCTTCGGCGTGCTCTTGCTGGAGCTTTTGACAGGAAGACATCCAGCACAGCATCCATTTCTTGAGCCAACTGATATGTTAGAATGGGTAAGGATAGTTAGGGAGGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGTAGTACTACATCCCCTGAACAGAGGCCGGCCATGTGGCAAGTTTTGAAAATGATTCTAGAAATCAAGGAGAGTGTCATGAGAGAGGACAGTGAATCTAGTGGCTTTTAA	1986	49.6	MIPNPPTFLPTFPLLCCVVLCSLSAFSASGFAFQIPPPALVPPEELRLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGTLAPNTVSQLDQLRILSLHNNSLEGPIPDLSGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLITLRLEWNGFNGSIPPLNQSFLEVFNVAGNNLTGQIPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSRAPFFEASNATPPSLPSDQSAQSQDILLSPVSHVKHKETGLIVGLSVGAAVLIAGLLCFYVAARTQRKTASKPEIPPFETDTAFSTASAINGRGDGKGELQAKMKEIEDIPKVQKSGSLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTAATSSEVFDRHLEAVGALLHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASKLIHGNLKSTNVLLGAEFEACLTDYGLSALAECCEDPDGSRYQAPETRKSSRNATHKSDVYAFGVLLLELLTGRHPAQHPFLEPTDMLEWVRIVREDDGGDSNQLGMLTEVASICSTTSPEQRPAMWQVLKMILEIKESVMREDSESSGF	661

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
10	2605039	2614123	-	Cp4.1LG10g02360.1	Cpe10g00446	475983

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cpe10g00446	661	Gene3D	Ribonuclease Inhibitor	49	205	IPR032675	-
	Cpe10g00446	661	Gene3D	Phosphorylase Kinase; domain 1	357	467	-	-
	Cpe10g00446	661	Pfam	Protein kinase domain	393	642	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cpe10g00446	661	Gene3D	Ribonuclease Inhibitor	206	255	IPR032675	-
	Cpe10g00446	661	ProSiteProfiles	Protein kinase domain profile.	390	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cpe10g00446	661	SUPERFAMILY	L domain-like	51	245	-	-
	Cpe10g00446	661	PANTHER	PROTEIN KINASE, PUTATIVE-RELATED	30	657	-	-
	Cpe10g00446	661	ProSiteProfiles	Leucine-rich repeat profile.	115	137	IPR001611	GO:0005515
	Cpe10g00446	661	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	30	657	-	-
	Cpe10g00446	661	SUPERFAMILY	Protein kinase-like (PK-like)	394	648	IPR011009	-
	Cpe10g00446	661	Gene3D	Transferase(Phosphotransferase) domain 1	469	659	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Cpe10g00446	Cpe19g00633	CCT
	Cpe10g00446	Cpe19g00633	ECH

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cpe01g00897	Cpe-Chr1:5271688	Cpe10g00446	Cpe-Chr10:2605039	1.75E-156	dispersed
	Cpe10g00446	Cpe-Chr10:2605039	Cpe04g01150	Cpe-Chr4:9863766	1.53E-110	dispersed
	Cpe01g00029	Cpe-Chr1:206335	Cpe10g00446	Cpe-Chr10:2605039	2.38E-130	transposed
	Cpe10g00446	Cpe-Chr10:2605039	Cpe19g00633	Cpe-Chr19:5138221	0	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	62650	PF00069	Pkinase	2.80E-29	CL0016	Cpe	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cpe10g00446	-		-	bhj:120074099	1140.56