Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00447 ATGGCTGTGGACCTCATCTCCCACCCCTACCCTCCTCCCTCCACCACCCACAATATGGAACCCAACGCCGTCCAAGAGGCTGCCTCAGGCCTCGAGAGCGTCGAGAAACTCATCCGATTGCTCTCCAATGCCCAACATCACTCCTTACCCACCTCTACTCAATCCCCCAATTCCACTTCCAATTCTCCCACCGATTTCCCCACCGACTGCCGCGCCGCCGCCGATGCTGCTGTCTCCAAGTTCAAAAAGGTTATTTCTCTCCTCGGCCGGAGCCGTCTTGGCCACGCTCGCTTCAGAAGAGCTCCTCTCCCTCTTCCTCAACCCCAAGTCCTCTACGCCACTCCCATCCAGCAGATCCCACCCCATCGCCATCTCCCCGCCGGCGACCTCGACAACAACGACTCTCTCACTACTACTCTTAATTTCTCTTATTCCTCTGCCCATAACTCCTTCATCTCCTCCTTGACCGGCGACTGTGATACCAAGCAGCCTTCCTCCTCCTCGCCTTTTCAGATTATCAACCTCTCCCAAGTCTCCTCCGCCGGGAAACCCCCCCTCTCTACTTCTTCGCTTAAGAGAAAGTGTAGCTCCGACAACCTGGGATCCGGCAAGTGCGGCGCTGCTTCTTCCTCCGGCCGATGCCACTGTTCCAAGAAGAGAAAAGTGAGAGTGAAGAGGGTGGTGAGGGTTCCGGCGATAAGCTTGAAAATGGCGGATATCCCACCGGACGACTATTCATGGAGGAAATATGGTCAAAAGCCCATTAAAGGCTCTCCACATCCCAGGGGTTATTACAAGTGTAGCAGCGTCAGAGGTTGCCCAGCCCGGAAACACGTAGAACGTGCCGGAGACGATCCGGCGATGCTAGTGGTGACCTACGAAGGAGAACACAATCACACTCTCTCTCTGCCCCAACCCTCCACTCTCATCCTCGAGTCTTCTTAG 945 55.66 MAVDLISHPYPPPSTTHNMEPNAVQEAASGLESVEKLIRLLSNAQHHSLPTSTQSPNSTSNSPTDFPTDCRAAADAAVSKFKKVISLLGRSRLGHARFRRAPLPLPQPQVLYATPIQQIPPHRHLPAGDLDNNDSLTTTLNFSYSSAHNSFISSLTGDCDTKQPSSSSPFQIINLSQVSSAGKPPLSTSSLKRKCSSDNLGSGKCGAASSSGRCHCSKKRKVRVKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAGDDPAMLVVTYEGEHNHTLSLPQPSTLILESS 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2618206 2619978 - Cp4.1LG10g02340.1 Cpe10g00447 475984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00447 314 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00447 314 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 314 IPR044810 GO:0003700
Cpe10g00447 314 SMART WRKY_cls 241 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00447 314 MobiDBLite consensus disorder prediction 47 66 - -
Cpe10g00447 314 Gene3D WRKY domain 225 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe10g00447 314 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 14 314 - -
Cpe10g00447 314 Pfam Plant zinc cluster domain 192 239 IPR018872 -
Cpe10g00447 314 SUPERFAMILY WRKY DNA-binding domain 238 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe10g00447 314 ProSiteProfiles WRKY domain profile. 236 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00447 Cpe16g00153 CCT
Cpe10g00447 Cpe16g00153 ECH
Cpe05g01181 Cpe10g00447 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00447 Cpe-Chr10:2618206 Cpe16g00153 Cpe-Chr16:3563077 4.69E-110 dispersed
Cpe10g00447 Cpe-Chr10:2618206 Cpe16g00152 Cpe-Chr16:3550772 4.69E-110 wgd
Cpe10g00447 Cpe-Chr10:2618206 Cpe19g00635 Cpe-Chr19:5145825 9.18E-28 wgd
Cpe10g00447 Cpe-Chr10:2618206 Cpe02g00194 Cpe-Chr2:1008099 1.22E-15 wgd
Cpe10g00447 Cpe-Chr10:2618206 Cpe05g01181 Cpe-Chr5:8145093 8.69E-98 wgd
Cpe10g00447 Cpe-Chr10:2618206 Cpe06g00175 Cpe-Chr6:949236 9.94E-111 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50104 PF03106 WRKY 3.50E-26 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00447 - - csv:101214001 446.817