Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00480 ATGGGGAAGAAACAGCACAGTAAAGACCGTTTGTTTATTACGAAAACCGAATGGGCCACTGAATGGGGTGGCGCCAAACCCAAGGACTCTCAAACCCCTTTCAAACGGCTTCCTTTCTATTGCTGCGCGCTTACATTTACACCCTTCGAGGACCCTGTATGTACCGCCGATGGCAGCGTCTTCGAGATAATGAATATCATCCCTTATATTCGAAAGTATGGTAAAAATCCTGTTACTGGAGCTTCCCTAAAGCAGGAGGATCTAATTCCGCTGATTTTCCACAAGAATTCTGAAGGTTGGCAAGACATTATAACCATTCAGAACCCTACTGCGCTTGATTGTAAGGTTCTTCTGGATTTTGATCATGTGAAGAATAGCCTGAAAGTTGATGATGAAGAACTTCAGAAAATGAAATCAGATCCAACATATTTCATAAATGTGTCGGGCGACATCAAGCAGATGCTGCAGGAACTTGGAACCGAAAAAGGAAGGCAAACTGCACTTCATGGCGGAGGTGGTGGCAAGGCACAGAAAGAAAGGGAGGCTGCACTTGCTGCAATTTTAGCTGCTAGGTCACGCATTAAAGAGGACTCCAAGGAGAATGCAAAAGGAGAGGAGAAACCTACTCAGGCATTTAGTATTGTGGATGCTGCATCTGCCTCAGTACATGGTAGAAGTGCTGCTGCTGCGAAAGCTGCACCAAGTGAAAAAACTGCTGCTCGAATTGCGATGCACATGGCGGGTGAGAGGGCACCAGTGAATGCTAAGATGGTAAAGAGTCGTTACACTACTGGTGCTACGTCCCGATCCTTCACATCTACAGCTTATGATCCTGTTACAAAGAACGAACATGAATATATCAAGGTTGAGAAAAATCCGAAGAAGAAAGGATACGTACAGTTGCATACAACACATGGAGATTTGAATATTGAACTGCATTGTGATATTACTCCGAGGGCATGTGAGAATTTCATCACGCTTTGTGAAAATGGCTACTACAATGGAGTTGCTTTTCATAGAAGTATTAGGAATTTCATGATTCAAGGTGGTGATCCAACTGGTACTGGGAGAGGAGGGGAATCTATATGGGGAAAGCCCTTCAACGATGAACTGAACTCTAAGTTGCTTCATTCTGGAAGGGGTGTTGTCAGTATGGCAAATAGTGGCCCCCACACTAATGGTTCCCAGTTCTTTATTCTTTACAAATCTGCTAATCACTTAAACTTCAAGCATACTGTATTTGGCGGTGTTGTTGGTGGGTTGACTGCTTTGGCAGCCATGGAAAAGGTTGCTGTTGATGACAATGATCGGCCTCTGGAGGAGATCAAGATAACAAGCGTCACAGTTTTTGTCAATCCATACTCAGAACCCGATGAAGAAGAGGAAGAAAAGCAAAAAGACGAGAAAAATGTGGAGGATGAGGAAAACGATAAGGTTGGATCGTGGTATAGTAATCCAGGCACCGGGGTAGCTGAATATGGAGCTGCTGGTGGTGGTGGTGGTGTAGGGAAATATTTAAAAGCAAGGAATGCCCAATCCAAATCCCCTGCTGTTGATGCTGGTGTAAGACAAACTACCTCAACCAAAAAAAGGACAGCTGCTGGAGAATTCAAAGACTTCTCTTCGTGGTAA 1632 44.24 MGKKQHSKDRLFITKTEWATEWGGAKPKDSQTPFKRLPFYCCALTFTPFEDPVCTADGSVFEIMNIIPYIRKYGKNPVTGASLKQEDLIPLIFHKNSEGWQDIITIQNPTALDCKVLLDFDHVKNSLKVDDEELQKMKSDPTYFINVSGDIKQMLQELGTEKGRQTALHGGGGGKAQKEREAALAAILAARSRIKEDSKENAKGEEKPTQAFSIVDAASASVHGRSAAAAKAAPSEKTAARIAMHMAGERAPVNAKMVKSRYTTGATSRSFTSTAYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFNDELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAMEKVAVDDNDRPLEEIKITSVTVFVNPYSEPDEEEEEKQKDEKNVEDEENDKVGSWYSNPGTGVAEYGAAGGGGGVGKYLKARNAQSKSPAVDAGVRQTTSTKKRTAAGEFKDFSSW 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2830884 2835221 - Cp4.1LG10g02090.1 Cpe10g00480 476017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00480 543 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 101 541 - -
Cpe10g00480 543 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 99 - -
Cpe10g00480 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 409 424 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 381 396 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 312 327 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 338 350 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 396 408 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 SUPERFAMILY Cyclophilin-like 298 466 IPR029000 -
Cpe10g00480 543 SMART Ubox_2 39 100 IPR003613 GO:0004842|GO:0016567
Cpe10g00480 543 MobiDBLite consensus disorder prediction 450 486 - -
Cpe10g00480 543 ProSiteProfiles U-box domain profile. 35 107 IPR003613 GO:0004842|GO:0016567
Cpe10g00480 543 MobiDBLite consensus disorder prediction 517 531 - -
Cpe10g00480 543 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 298 449 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 CDD RING-Ubox_PPIL2 38 99 IPR026951 -
Cpe10g00480 543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 95 IPR013083 -
Cpe10g00480 543 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 302 449 IPR002130 GO:0000413|GO:0003755
Cpe10g00480 543 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 99 IPR044666 -
Cpe10g00480 543 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 101 541 IPR044666 -
Cpe10g00480 543 SUPERFAMILY RING/U-box 37 97 - -
Cpe10g00480 543 Gene3D - 277 463 IPR029000 -
Cpe10g00480 543 MobiDBLite consensus disorder prediction 504 543 - -
Cpe10g00480 543 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 333 350 IPR020892 GO:0003755|GO:0006457
Cpe10g00480 543 CDD cyclophilin_RING 298 455 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00480 Cpe19g00671 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00272 Cpe-Chr2:1409509 Cpe10g00480 Cpe-Chr10:2830884 4.30E-44 dispersed
Cpe03g01691 Cpe-Chr3:12872048 Cpe10g00480 Cpe-Chr10:2830884 1.41E-55 dispersed
Cpe08g00494 Cpe-Chr8:3192032 Cpe10g00480 Cpe-Chr10:2830884 3.14E-28 dispersed
Cpe10g00480 Cpe-Chr10:2830884 Cpe04g00267 Cpe-Chr4:3341512 1.24E-33 dispersed
Cpe10g00480 Cpe-Chr10:2830884 Cpe16g00113 Cpe-Chr16:2241725 1.18E-44 wgd
Cpe10g00480 Cpe-Chr10:2830884 Cpe19g00671 Cpe-Chr19:5352480 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00480 K10598 - csv:101204462 911.753