Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00499 | ATGAATAATGTTAATGGCAACAACTGTGACTGGCTAGGCTTCTCTGTCTCCCCTAACGTTAGCATGGAGCTTTCTTCTTCCTCTGCTACTGCTGTCTCCTCTTCAATTCCTGCAAACCTTTTTCACTCCCCATCACAATTTAACTATGGCATTTGCTATGGCGTCGATGGAGAAAATGGTGGCTTTTATTCACCATTGTCTGCCATGCCACTCAAGTCAGATGGCTCAATTTGTTCAATGGAATCACTCAGCAGGCAGCATCCACAAGTGGCGAGTAGCTCTACTCCAAAACTAGAGGATTTCTTCGGTGGCGCAACTATGGGGTCCCATCACTATGAAAGCAATGGCAGGGAAGCTATGGCTCTCAGCCTCGACAGCATTTTTTGCCATCAAAACCCAACTCATGAGCCCAACAACCAACCCTTTGCGCATTTCTCATCCTTGAGAAGCCGTGAAGGGATGCTTCAAGACTCGAAGGTAATCCTGCCTGATGGGTGCAATCTGCAGCAGCAGCAGCACCCACCAGCAGTGATAGAGACTAAGAATTCTGGTCTGAATTGGGCTGTTCCTAGGAACTATGCTGTCGCTAATAATGGTTCGTTCGAGCAGAAGATGGTGAGTTTCATGAGTGAAAATGGTGGAGAATCTGGTCCCATTAATGCCATGGCTTATGGAGATTTACATTCATTGAGCTTGTCCATGACTATGAGCCCCAGCTCTCAGTCAAGCTGTGTTACAGCCACACAGCATGCTTCACCTGCCTTGGCTGACTGTTCTGCTATGGATACAAAGAAAAGAGGCCATGAGAAGCTTGATCAGAAGCAAATTGTTCATAGGAAGTCTTTAGACACTTTTGGACAGAGAACCTCCCAGTACAGAGGGGTTACAAGGCACAGATGGACGGGTAGGTATGAAGCACATTTGTGGGATAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAGGGAAGGCAAGGAGGTTATGATATGGAAGAAAAAGCCGCCAGAGCTTATGATCTTGCTGCACTCAAGTATTGGGGACCCTCCACCCACATCAACTCTCCTGTGGAGAACTATCAGAAAGAATTAGAGGAAATGAAGAACATGAGTAGGCAGGAATATGTTGCTCACCTCAGAAGGCAAGCTCATTTTTATCATGTACATCATCAACATGGAAGATGGCAGGCTCGGATTGGGCGAGTTGCTGGTAACAAAGATCTGTATCTTGGGACATTCAGTACTCAAGAGGAAGCAGCCGAAGCCTATGACATAGCAGCCATCAAATTTCGAGGAATGAATGCCGTTACTAATTTCAATATCACGAGGTATGATGTGGAGCGGATCATTGCCAGCAATACCCTTCTTAGTGGCGATCTAGCTAAGAGAAAGCAGCAGCCTGAGTTTGATAATGAATCACTTAGACAAACCCCTCCTACTCACAACAGCAATTCAGAAGCTCTTCATTTGCCCACTCAGAGTAATCAAAGTGAATCAGAATGGAAGATGGCTCTTTATCAGTCGTCGCAACAGCTCATTCCAAAACCACGATTGCCGTCTGCTATAACCGATGATGGATCACAACTCGGAGTCGAAGACTCGGCCAGAATGGGAGCTCATTTCTCCAATGCATCTTCAATTGTGACCAGCTGCAGCTTTAGCAGCTCGAGGGAGGAGAGTCCAGACAAGACGAGCCTTTCAATGGTGTTCGGAATGCCTCAATCGACGTCTAAGCCATTTGCTACCTCTGGTAGTAATATGAACTCCTCCTCCTGGATTGCATCTGCCCAGCAGTTGAGGGCAGCCAATTGTATGAGCCAGTTGCCAGTGTTTGCTGCCTGGTCTGATAGTTGA | 1848 | 46.65 | MNNVNGNNCDWLGFSVSPNVSMELSSSSATAVSSSIPANLFHSPSQFNYGICYGVDGENGGFYSPLSAMPLKSDGSICSMESLSRQHPQVASSSTPKLEDFFGGATMGSHHYESNGREAMALSLDSIFCHQNPTHEPNNQPFAHFSSLRSREGMLQDSKVILPDGCNLQQQQHPPAVIETKNSGLNWAVPRNYAVANNGSFEQKMVSFMSENGGESGPINAMAYGDLHSLSLSMTMSPSSQSSCVTATQHASPALADCSAMDTKKRGHEKLDQKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINSPVENYQKELEEMKNMSRQEYVAHLRRQAHFYHVHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGMNAVTNFNITRYDVERIIASNTLLSGDLAKRKQQPEFDNESLRQTPPTHNSNSEALHLPTQSNQSESEWKMALYQSSQQLIPKPRLPSAITDDGSQLGVEDSARMGAHFSNASSIVTSCSFSSSREESPDKTSLSMVFGMPQSTSKPFATSGSNMNSSSWIASAQQLRAANCMSQLPVFAAWSDS | 615 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2922938 | 2926361 | + | Cp4.1LG10g01960.1 | Cpe10g00499 | 476036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00499 | 615 | CDD | AP2 | 290 | 355 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | Gene3D | AP2/ERF domain | 290 | 356 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | Gene3D | AP2/ERF domain | 384 | 440 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | MobiDBLite | consensus disorder prediction | 469 | 492 | - | - | |
Cpe10g00499 | 615 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 8 | 613 | - | - | |
Cpe10g00499 | 615 | ProSiteProfiles | AP2/ERF domain profile. | 291 | 354 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 8 | 613 | - | - | |
Cpe10g00499 | 615 | SMART | rav1_2 | 387 | 444 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | SMART | rav1_2 | 291 | 360 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | SUPERFAMILY | DNA-binding domain | 290 | 354 | IPR016177 | GO:0003677 | |
Cpe10g00499 | 615 | Pfam | AP2 domain | 390 | 430 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | Pfam | AP2 domain | 291 | 346 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | SUPERFAMILY | DNA-binding domain | 387 | 439 | IPR016177 | GO:0003677 | |
Cpe10g00499 | 615 | CDD | AP2 | 388 | 440 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | ProSiteProfiles | AP2/ERF domain profile. | 372 | 438 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | PRINTS | Ethylene responsive element binding protein signature | 420 | 440 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | PRINTS | Ethylene responsive element binding protein signature | 292 | 303 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe10g00499 | 615 | MobiDBLite | consensus disorder prediction | 459 | 492 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00238 | Cpe-Chr2:1220356 | Cpe10g00499 | Cpe-Chr10:2922938 | 1.33E-112 | dispersed | |
Cpe06g00218 | Cpe-Chr6:1159931 | Cpe10g00499 | Cpe-Chr10:2922938 | 9.49E-34 | dispersed | |
Cpe10g00499 | Cpe-Chr10:2922938 | Cpe16g00890 | Cpe-Chr16:8370460 | 9.23E-97 | dispersed | |
Cpe10g00499 | Cpe-Chr10:2922938 | Cpe11g00106 | Cpe-Chr11:586597 | 2.74E-159 | wgd | |
Cpe10g00499 | Cpe-Chr10:2922938 | Cpe19g00692 | Cpe-Chr19:5444619 | 0 | wgd | |
Cpe10g00499 | Cpe-Chr10:2922938 | Cpe07g00532 | Cpe-Chr7:3517977 | 1.09E-06 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50115 | PF00847 | AP2 | 4.00E-10 | CL0081 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00499 | K09285 | - | csv:101203323 | 1078.16 |