Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00515 ATGCGCCTTCTTCTTCTTTTCCTCTGTCTTCTCCAACTCCAACTCCACATTCACCATTCTCTTTCTGCTGGTGTTTCTGAGTATCGTGCCCTTCTCTCCCTCAAAATCTCCATTAATGGCGACCCCAAATCCTCTCTCTCTTCCTGGAACGCCTCCACCAGTCACTGTACTTGGTTTGGGGTCACTTGCGATTTCCGTCGCCATGTCATTGCCTTAGACCTCTCTGGTCTCGGCCTTTCCGGTTCCCTTTCCCCTGATGTTGCCTTTTTAAGATTTCTTACTAATCTTTCTCTTGCTGCCAATGAGTTTTCTGGTCCAATCCCGCTGGAGATTTCTTCACTCTCTTACCTTCGGTTCCTTAACCTCTCTAATAATGTGTTCGATGGATCGTTCCCTTCGCGGCTTTCAGAGCTCCAGAATCTGCAGGTTCTTGACTTGTATAACAACAATATGACTGGAGATTTCCCCGTTGTGATCACTGAAATGTTGAGCCTTCGCCATCTGCATTTGGGTGGAAATTTCTTTACCGGACGGATCCCGTCGGAGGTTGGTCGGCTGCAGTCTTTGGAGTACTTGGCGGTTTCCGGTAACGAACTTGGCGGTCCGATACCGCCCGAGATTGGAAACTTGAAGAACCTTCGAGAGCTCTACATTGGCTACTTTAACGCCTACGACGGCGGTATTCCGGCCGAGATTGGGAATTTGTCGGAGTTGGTACGGTTGGACGCTGCGAACTGTGGACTGTCTGGACGGATTCCGCCGGAGCTCGGAAAGCTGAAGAGCCTTGATACTCTGTTTCTCCAAGTTAATGCTCTATCTGGGCCACTGACGCCGGAGATTGGAGAGTTGAACAACTTGAAGTCGTTGGATTTGTCGAACAATATGCTTGTGGGTGAGATTCCCGTATCGTTCGCCGAGTTGAAGAACTTGACGCTGTTGAATCTGTTTAGAAACAAGCTACATGGGGGGATTCCATCCTTTATTGGCGACTTGCCGAAGCTGGAGGTGTTGCAGTTATGGGAGAATAATTTCACGGAAGCGATTCCACAGAACCTGGGGAAGAACGGAATGCTTCGGATTCTGGATATTTCTTCCAACAAGCTGACTGGAACTCTCCCTCCTGATGTTTGCTACGGTAATCGGCTTCAAACTCTGATCGCATTGAGCAATTTTTTGTTCGGTCCAATTCCAGAATCGCTAGGCAAATGCGTTTCACTTAATCGTATCCGTATGGGGGAAAATTTTCTCAATGGATCCATTCCGAAGGGGCTTCTGAGTCTGCCCAAGCTCTCTCAGGTGGAGTTACAGGACAATTTTCTCTCCGGCGAATTCCCAATAACCGACTCAATCTCAAAGAATCTCGGCCAGATTAGTCTCTCGAACAACCGACTCACTGGGTCGATTCCACCTACAATCGCCAACTTCTCCGGCGTCCAGAAACTACTTCTCGACGGAAACAAGTTCTCCGGTCAAATCCCACCTGAGATTGGGCGGTTACAGCAACTTTCGAAGATTGATTTCAGTAACAATAAGTTATCGGGTCCAATCGCGCCGGATATTAGCCAATGCAAGCTTCTAACCTTCGCCGATCTCAGTCGAAACAAGCTCTCGGGAGAAATTCCGATCGAGATTACCAGTATGAGGATATTAAATTACCTGAATCTCTCAAGAAACCATTTAGTCGGCGGAATCCCTGCTTCCATAGCCAGAATGCAGAGTTTAACCTCTGTGGATTTCTCATATAACAACCTCTCTGGTTTAGTTCCGGTAACTGGGCAATTCAGTTACTTCAATTATACTTCGTTTGTGGGCAATCTCGATCTCTGCGGACCATATTTGGGGCCATGCAAAGATGGGGTTGCCAATAGCAATTACCAACAACGCTTCAAGGGCCCCCTCTTTGCTTCCCTCAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCAATTGCATTTGCAGTTGCTGCCATCATCAAAGCTCGATCGCTAAAGAAAGCCAGTGAGTCTCGGGCTTGGAAATTAACATCCTTCCAACGCCTAGATTACACCGTTGATGATGTTCTTGATTGCTTGAAAGAGGATAACATTATTGGAAAAGGAGGGGGTGGCATTGTCTATAAAGGGGTGATGCCAAGTGAATACGCCTACACACTAAAAGTCGACGAGAAGAGTGATGTATATAGCTTTGGAGTCGTCTTGTTGGAGCTTGTTAGTGGAAGAAAACCGGTCGGAGAATTTGGTGATGGTGTGGACATAGTTCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGTAGTGAAAATCCTTGATCCAAGGCTCTCCTCCATTCCTCGCCACGAAGTGATGCACGTCTTCTACGTCGCAATGCTGTGCGTTGAAGAACAGGCAGTAGAGCGCCCGACAATGCGAGAAGTGATCCAAATCCTATCGGAGATTCCACAGCCACCATGTTCAAAACGGGAAGACTCAACACTACCCAACTCCTCACCACCACCACCAACACCAGCATTAGCCGCCGCATTAGACATTCAAACAACAGGACCCGAGAACAAAAAAGACCAGCAGCAGCAGCAGCAGCAGCCGCCAGCAGATCTTCTTAGCACTTGA 2613 47.72 MRLLLLFLCLLQLQLHIHHSLSAGVSEYRALLSLKISINGDPKSSLSSWNASTSHCTWFGVTCDFRRHVIALDLSGLGLSGSLSPDVAFLRFLTNLSLAANEFSGPIPLEISSLSYLRFLNLSNNVFDGSFPSRLSELQNLQVLDLYNNNMTGDFPVVITEMLSLRHLHLGGNFFTGRIPSEVGRLQSLEYLAVSGNELGGPIPPEIGNLKNLRELYIGYFNAYDGGIPAEIGNLSELVRLDAANCGLSGRIPPELGKLKSLDTLFLQVNALSGPLTPEIGELNNLKSLDLSNNMLVGEIPVSFAELKNLTLLNLFRNKLHGGIPSFIGDLPKLEVLQLWENNFTEAIPQNLGKNGMLRILDISSNKLTGTLPPDVCYGNRLQTLIALSNFLFGPIPESLGKCVSLNRIRMGENFLNGSIPKGLLSLPKLSQVELQDNFLSGEFPITDSISKNLGQISLSNNRLTGSIPPTIANFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSNNKLSGPIAPDISQCKLLTFADLSRNKLSGEIPIEITSMRILNYLNLSRNHLVGGIPASIARMQSLTSVDFSYNNLSGLVPVTGQFSYFNYTSFVGNLDLCGPYLGPCKDGVANSNYQQRFKGPLFASLKLLLVIGLLLCSIAFAVAAIIKARSLKKASESRAWKLTSFQRLDYTVDDVLDCLKEDNIIGKGGGGIVYKGVMPSEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEVVKILDPRLSSIPRHEVMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPCSKREDSTLPNSSPPPPTPALAAALDIQTTGPENKKDQQQQQQQPPADLLST 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3024430 3028968 - Cp4.1LG10g01720.1 Cpe10g00515 476052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00515 870 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Cpe10g00515 870 PANTHER - 713 836 - -
Cpe10g00515 870 PANTHER - 1 711 - -
Cpe10g00515 870 MobiDBLite consensus disorder prediction 815 870 - -
Cpe10g00515 870 Gene3D Ribonuclease Inhibitor 136 222 IPR032675 -
Cpe10g00515 870 Gene3D Ribonuclease Inhibitor 376 617 IPR032675 -
Cpe10g00515 870 SUPERFAMILY RNI-like 72 408 - -
Cpe10g00515 870 Pfam Protein tyrosine and serine/threonine kinase 710 811 IPR001245 GO:0004672|GO:0006468
Cpe10g00515 870 PANTHER UNNAMED PRODUCT 1 711 - -
Cpe10g00515 870 Pfam Leucine Rich Repeat 285 306 IPR001611 GO:0005515
Cpe10g00515 870 Pfam Leucine Rich Repeat 164 182 IPR001611 GO:0005515
Cpe10g00515 870 PANTHER UNNAMED PRODUCT 713 836 - -
Cpe10g00515 870 Gene3D Ribonuclease Inhibitor 223 375 IPR032675 -
Cpe10g00515 870 Gene3D Transferase(Phosphotransferase) domain 1 689 826 - -
Cpe10g00515 870 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Cpe10g00515 870 SUPERFAMILY L domain-like 300 616 - -
Cpe10g00515 870 SMART LRR_typ_2 571 594 IPR003591 -
Cpe10g00515 870 SMART LRR_typ_2 162 186 IPR003591 -
Cpe10g00515 870 SMART LRR_typ_2 356 379 IPR003591 -
Cpe10g00515 870 SMART LRR_typ_2 331 355 IPR003591 -
Cpe10g00515 870 SMART LRR_typ_2 499 523 IPR003591 -
Cpe10g00515 870 SMART LRR_typ_2 283 306 IPR003591 -
Cpe10g00515 870 MobiDBLite consensus disorder prediction 849 870 - -
Cpe10g00515 870 SUPERFAMILY Protein kinase-like (PK-like) 710 843 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00064 Cpe-Chr2:333563 Cpe10g00515 Cpe-Chr10:3024430 0 dispersed
Cpe06g00058 Cpe-Chr6:303308 Cpe10g00515 Cpe-Chr10:3024430 0 dispersed
Cpe10g00515 Cpe-Chr10:3024430 Cpe19g00711 Cpe-Chr19:5552119 1.52E-95 dispersed
Cpe10g00515 Cpe-Chr10:3024430 Cpe19g00710 Cpe-Chr19:5545685 1.88E-06 wgd
Cpe10g00515 Cpe-Chr10:3024430 Cpe02g00508 Cpe-Chr2:2984020 8.73E-53 wgd
Cpe10g00515 Cpe-Chr10:3024430 Cpe06g00472 Cpe-Chr6:2787761 4.05E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62653 PF07714 PK_Tyr_Ser-Thr 2.80E-08 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00515 - - csv:101219011 1241.87