Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00530 | ATGGCGAAATCACCGGCCGAAGAGCACCCTAATAAGGCTTTTGGATGGGCTGCCAGAGATACCTCCGGCGTTCTTTCTCCATTTAATTTCTCCCGAAGAGAAACAGGGGACAATGATGTAGCTTTTAAAGTTCTTTACTGTGGGATATGCCATTCTGATCTTCACATGTTGAAAAACGAGTGGGGCAATACCATTTACCCTATTGTTCCTGGGCATGAAATCGCGGGTGAGGTAACAGAGGTTGGAAGCAAAGTAAAGAATTTCAAGGTTGGAGACAGAGTGGGCGTAGGATGTATGGTTGGATCCTGCCGCTCCTGTGATAGCTGTTCCAACGACCTTGAGAACTATTGCCCAAAAATGATTCTCACCTACTCCGCCAAGGACTCCGATGGCACCATAACCTACGGTGGCTACTCCGACTGTATGGTCGCCAACGAGCACTTCATTGTTCGCATTCCTGACAGCATCCCTCTGCACGCCGGGGCTCCGCTGCTTTGCGCTGGTATCACGGTTTACAGCCCCTTGCGATACTATGGACTTGACAAGCCTGGAATGAAAATCGGCGTGGTTGGCCTCGGAGGGCTTGGCCATGTAGCTGTCAAATTTGCCAAGGCCCTTGGCGCTAAGGTCACTGTGATTAGCACCTCGCCTAACAAGAAGCAGGAGGCTATTGAACGTCTTGGAGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAGATGCAGGCTGCTAAGGGGACGTTGGATGGTATCATAGACACAGTCTCTGCCTCACATCCCCTGCTTCCTCTGCTTTCTCTTGTGAAAACACATGGAAAGTTTGTTCTGGTCGGTGCACCAGAGAAGCCTCTCGAGGTCCCAGCCTTCGCTCTTATTGGGGGTAGGAAAACACTGTCGGGTAGTTGCATTGGAGGGATTAAGGAAACGCAAGAGATGATTGATTTTGCGGCCAAACACAACATAACTGCGGATGTTGAGGTGATTCCGATAGCCGATGTCAACACCGCCATGGAGCGTATGATAAAACAGGATGTCAAATATCGATTCGTCATCGACATTGGCAACACAATGAAGCCTAGCACTTAA | 1086 | 49.63 | MAKSPAEEHPNKAFGWAARDTSGVLSPFNFSRRETGDNDVAFKVLYCGICHSDLHMLKNEWGNTIYPIVPGHEIAGEVTEVGSKVKNFKVGDRVGVGCMVGSCRSCDSCSNDLENYCPKMILTYSAKDSDGTITYGGYSDCMVANEHFIVRIPDSIPLHAGAPLLCAGITVYSPLRYYGLDKPGMKIGVVGLGGLGHVAVKFAKALGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQMQAAKGTLDGIIDTVSASHPLLPLLSLVKTHGKFVLVGAPEKPLEVPAFALIGGRKTLSGSCIGGIKETQEMIDFAAKHNITADVEVIPIADVNTAMERMIKQDVKYRFVIDIGNTMKPST | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3105169 | 3107566 | - | Cp4.1LG10g01530.1 | Cpe10g00530 | 476067 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00530 | 361 | SUPERFAMILY | GroES-like | 20 | 184 | IPR011032 | - | |
Cpe10g00530 | 361 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 157 | 321 | IPR036291 | - | |
Cpe10g00530 | 361 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
Cpe10g00530 | 361 | CDD | CAD1 | 14 | 352 | - | - | |
Cpe10g00530 | 361 | PANTHER | LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE | 2 | 359 | - | - | |
Cpe10g00530 | 361 | Pfam | Zinc-binding dehydrogenase | 194 | 317 | IPR013149 | - | |
Cpe10g00530 | 361 | Pfam | Alcohol dehydrogenase GroES-like domain | 38 | 151 | IPR013154 | - | |
Cpe10g00530 | 361 | Gene3D | - | 167 | 323 | - | - | |
Cpe10g00530 | 361 | SMART | PKS_ER_names_mod | 23 | 351 | IPR020843 | GO:0016491 | |
Cpe10g00530 | 361 | Gene3D | - | 16 | 353 | - | - | |
Cpe10g00530 | 361 | PANTHER | ALDEHYDE REDUCTASE | 2 | 359 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00059 | Cpe-Chr2:305614 | Cpe10g00530 | Cpe-Chr10:3105169 | 4.57E-139 | dispersed | |
Cpe05g00755 | Cpe-Chr5:4663821 | Cpe10g00530 | Cpe-Chr10:3105169 | 4.51E-112 | dispersed | |
Cpe05g01099 | Cpe-Chr5:7330666 | Cpe10g00530 | Cpe-Chr10:3105169 | 3.76E-112 | dispersed | |
Cpe10g00530 | Cpe-Chr10:3105169 | Cpe16g00065 | Cpe-Chr16:1275558 | 3.97E-152 | dispersed | |
Cpe01g00421 | Cpe-Chr1:2441840 | Cpe10g00530 | Cpe-Chr10:3105169 | 1.60E-114 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00530 | - | K23232 | csv:101222715 | 671.003 |