Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00530 ATGGCGAAATCACCGGCCGAAGAGCACCCTAATAAGGCTTTTGGATGGGCTGCCAGAGATACCTCCGGCGTTCTTTCTCCATTTAATTTCTCCCGAAGAGAAACAGGGGACAATGATGTAGCTTTTAAAGTTCTTTACTGTGGGATATGCCATTCTGATCTTCACATGTTGAAAAACGAGTGGGGCAATACCATTTACCCTATTGTTCCTGGGCATGAAATCGCGGGTGAGGTAACAGAGGTTGGAAGCAAAGTAAAGAATTTCAAGGTTGGAGACAGAGTGGGCGTAGGATGTATGGTTGGATCCTGCCGCTCCTGTGATAGCTGTTCCAACGACCTTGAGAACTATTGCCCAAAAATGATTCTCACCTACTCCGCCAAGGACTCCGATGGCACCATAACCTACGGTGGCTACTCCGACTGTATGGTCGCCAACGAGCACTTCATTGTTCGCATTCCTGACAGCATCCCTCTGCACGCCGGGGCTCCGCTGCTTTGCGCTGGTATCACGGTTTACAGCCCCTTGCGATACTATGGACTTGACAAGCCTGGAATGAAAATCGGCGTGGTTGGCCTCGGAGGGCTTGGCCATGTAGCTGTCAAATTTGCCAAGGCCCTTGGCGCTAAGGTCACTGTGATTAGCACCTCGCCTAACAAGAAGCAGGAGGCTATTGAACGTCTTGGAGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAGATGCAGGCTGCTAAGGGGACGTTGGATGGTATCATAGACACAGTCTCTGCCTCACATCCCCTGCTTCCTCTGCTTTCTCTTGTGAAAACACATGGAAAGTTTGTTCTGGTCGGTGCACCAGAGAAGCCTCTCGAGGTCCCAGCCTTCGCTCTTATTGGGGGTAGGAAAACACTGTCGGGTAGTTGCATTGGAGGGATTAAGGAAACGCAAGAGATGATTGATTTTGCGGCCAAACACAACATAACTGCGGATGTTGAGGTGATTCCGATAGCCGATGTCAACACCGCCATGGAGCGTATGATAAAACAGGATGTCAAATATCGATTCGTCATCGACATTGGCAACACAATGAAGCCTAGCACTTAA 1086 49.63 MAKSPAEEHPNKAFGWAARDTSGVLSPFNFSRRETGDNDVAFKVLYCGICHSDLHMLKNEWGNTIYPIVPGHEIAGEVTEVGSKVKNFKVGDRVGVGCMVGSCRSCDSCSNDLENYCPKMILTYSAKDSDGTITYGGYSDCMVANEHFIVRIPDSIPLHAGAPLLCAGITVYSPLRYYGLDKPGMKIGVVGLGGLGHVAVKFAKALGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQMQAAKGTLDGIIDTVSASHPLLPLLSLVKTHGKFVLVGAPEKPLEVPAFALIGGRKTLSGSCIGGIKETQEMIDFAAKHNITADVEVIPIADVNTAMERMIKQDVKYRFVIDIGNTMKPST 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3105169 3107566 - Cp4.1LG10g01530.1 Cpe10g00530 476067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00530 361 SUPERFAMILY GroES-like 20 184 IPR011032 -
Cpe10g00530 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Cpe10g00530 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Cpe10g00530 361 CDD CAD1 14 352 - -
Cpe10g00530 361 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 2 359 - -
Cpe10g00530 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Cpe10g00530 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Cpe10g00530 361 Gene3D - 167 323 - -
Cpe10g00530 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Cpe10g00530 361 Gene3D - 16 353 - -
Cpe10g00530 361 PANTHER ALDEHYDE REDUCTASE 2 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00059 Cpe-Chr2:305614 Cpe10g00530 Cpe-Chr10:3105169 4.57E-139 dispersed
Cpe05g00755 Cpe-Chr5:4663821 Cpe10g00530 Cpe-Chr10:3105169 4.51E-112 dispersed
Cpe05g01099 Cpe-Chr5:7330666 Cpe10g00530 Cpe-Chr10:3105169 3.76E-112 dispersed
Cpe10g00530 Cpe-Chr10:3105169 Cpe16g00065 Cpe-Chr16:1275558 3.97E-152 dispersed
Cpe01g00421 Cpe-Chr1:2441840 Cpe10g00530 Cpe-Chr10:3105169 1.60E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00530 - K23232 csv:101222715 671.003