Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00532 ATGAGGTTGCTGAATGAAATTGGTGGGAATATTGTCTGTCTCTTAAGCAATCCTAATTTTTATTTTTCAGAAAAGAATTTCAAGTCATGGAGACCTAATATTTCACTTCATGCAAATAGTAGTCATACTGTTATCGGGGATACGGTCAAGCAAACACATCAGCTGGTTCCTAATTTAATTGGAGGGGAGTTCTTGGATTCGCACAACTGTCCAGTGGTTGATGTTATCAATCCAGCAACACAAGAAGTTGTTTCTCATGTTCCTTTAACAACCTATGAAGAGTTTAAGGCCGCAGTTAATGCAGCCAAACAAGCCTTTCCCTCATGGAAAAACACACCGATTTCTACTCGTCAATGTATTATGTTTGAGTTCCAGAAGCTCATCCTCAGAGACATGGATAAGCTTGTGACGAATATTGTCACAGAACAGGGAAAAACATTAAAGGATGCTCAAAATGATATCATCTGTGGTTTAGAGGTGGTTAAACATGTTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCGTCCCTAATGCATCTGATGGAATTGACTCGTATTGCATCCGAGATCCAATAGGTGTTTGTGCTGGGATCTGCTCTTTTAACCATCCAGCAACAGTTTCCTTATGGATGTTCCCGATTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAACATACCCGGGGGCTTCAATGTTGCTAGCTGCATTAGCAGTGGAGGCTGGCTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCATAAACTATATATGTGACGATGAGGACATAAAAGCCATATCTTTTGCCAGTTCATGTTCTGCTGGAAAGAACATATATGCTAGGGCCGCTGCTACGGGAAAGCAAGTTCAGTCCCACTTAGGAGGCAAGAGCCATGCAATTATTATGCCTGATGCTAACATGGAGGCTACTTTAAATGCTCTGGTTGATGCTGGATTCGGTACTTCTGGACAGACATGTATGGCTATCAACATTGTTGTCTCCGTTGGGAGTTCAATTCTATGGGAAAAAAAACTTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGGACAGATCCCAATGCTGACCTTGGTCCTGTAATTACCAAAGAGGTGAAAGATCGTTTTTGTAGATTAGTTCAAAGTGGCATTGAAGATGGTGCTAGACTTCTGCTTGACGGTAGAGATATTGTGGTCCCAGGATATGAAAATGGAAATTTTGTTGGTCCAACCATTTTATCTGATGTAACAACGGACATGGAGTGCTACAAGGAAGAATTTCTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAGGAGGCTATATCCATTGTAAACAGAAACAAGTACTTCTTTTAA 1386 41.2 MRLLNEIGGNIVCLLSNPNFYFSEKNFKSWRPNISLHANSSHTVIGDTVKQTHQLVPNLIGGEFLDSHNCPVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWKNTPISTRQCIMFEFQKLILRDMDKLVTNIVTEQGKTLKDAQNDIICGLEVVKHVCGLATMQMGEFVPNASDGIDSYCIRDPIGVCAGICSFNHPATVSLWMFPIAVTCGNTFVLKPCETYPGASMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEDIKAISFASSCSAGKNIYARAAATGKQVQSHLGGKSHAIIMPDANMEATLNALVDAGFGTSGQTCMAINIVVSVGSSILWEKKLVECAKALKVNVGTDPNADLGPVITKEVKDRFCRLVQSGIEDGARLLLDGRDIVVPGYENGNFVGPTILSDVTTDMECYKEEFLGPVLLCMQADNLEEAISIVNRNKYFF 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3113643 3124959 + Cp4.1LG10g01640.1 Cpe10g00532 476069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00532 461 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 459 IPR016163 GO:0016620
Cpe10g00532 461 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Cpe10g00532 461 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 300 IPR016162 GO:0016491
Cpe10g00532 461 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 58 459 IPR010061 GO:0004491
Cpe10g00532 461 Pfam Aldehyde dehydrogenase family 68 459 IPR015590 GO:0016491
Cpe10g00532 461 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 22 459 IPR010061 GO:0004491
Cpe10g00532 461 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 22 459 - -
Cpe10g00532 461 SUPERFAMILY ALDH-like 50 459 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00532 Cpe-Chr10:3113643 Cpe04g01139 Cpe-Chr4:9800137 8.90E-46 dispersed
Cpe10g00532 Cpe-Chr10:3113643 Cpe04g00361 Cpe-Chr4:4234773 4.32E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00532 K00140 - csv:101207178 781.171