Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00532 | ATGAGGTTGCTGAATGAAATTGGTGGGAATATTGTCTGTCTCTTAAGCAATCCTAATTTTTATTTTTCAGAAAAGAATTTCAAGTCATGGAGACCTAATATTTCACTTCATGCAAATAGTAGTCATACTGTTATCGGGGATACGGTCAAGCAAACACATCAGCTGGTTCCTAATTTAATTGGAGGGGAGTTCTTGGATTCGCACAACTGTCCAGTGGTTGATGTTATCAATCCAGCAACACAAGAAGTTGTTTCTCATGTTCCTTTAACAACCTATGAAGAGTTTAAGGCCGCAGTTAATGCAGCCAAACAAGCCTTTCCCTCATGGAAAAACACACCGATTTCTACTCGTCAATGTATTATGTTTGAGTTCCAGAAGCTCATCCTCAGAGACATGGATAAGCTTGTGACGAATATTGTCACAGAACAGGGAAAAACATTAAAGGATGCTCAAAATGATATCATCTGTGGTTTAGAGGTGGTTAAACATGTTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCGTCCCTAATGCATCTGATGGAATTGACTCGTATTGCATCCGAGATCCAATAGGTGTTTGTGCTGGGATCTGCTCTTTTAACCATCCAGCAACAGTTTCCTTATGGATGTTCCCGATTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAACATACCCGGGGGCTTCAATGTTGCTAGCTGCATTAGCAGTGGAGGCTGGCTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCATAAACTATATATGTGACGATGAGGACATAAAAGCCATATCTTTTGCCAGTTCATGTTCTGCTGGAAAGAACATATATGCTAGGGCCGCTGCTACGGGAAAGCAAGTTCAGTCCCACTTAGGAGGCAAGAGCCATGCAATTATTATGCCTGATGCTAACATGGAGGCTACTTTAAATGCTCTGGTTGATGCTGGATTCGGTACTTCTGGACAGACATGTATGGCTATCAACATTGTTGTCTCCGTTGGGAGTTCAATTCTATGGGAAAAAAAACTTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGGACAGATCCCAATGCTGACCTTGGTCCTGTAATTACCAAAGAGGTGAAAGATCGTTTTTGTAGATTAGTTCAAAGTGGCATTGAAGATGGTGCTAGACTTCTGCTTGACGGTAGAGATATTGTGGTCCCAGGATATGAAAATGGAAATTTTGTTGGTCCAACCATTTTATCTGATGTAACAACGGACATGGAGTGCTACAAGGAAGAATTTCTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAGGAGGCTATATCCATTGTAAACAGAAACAAGTACTTCTTTTAA | 1386 | 41.2 | MRLLNEIGGNIVCLLSNPNFYFSEKNFKSWRPNISLHANSSHTVIGDTVKQTHQLVPNLIGGEFLDSHNCPVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWKNTPISTRQCIMFEFQKLILRDMDKLVTNIVTEQGKTLKDAQNDIICGLEVVKHVCGLATMQMGEFVPNASDGIDSYCIRDPIGVCAGICSFNHPATVSLWMFPIAVTCGNTFVLKPCETYPGASMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEDIKAISFASSCSAGKNIYARAAATGKQVQSHLGGKSHAIIMPDANMEATLNALVDAGFGTSGQTCMAINIVVSVGSSILWEKKLVECAKALKVNVGTDPNADLGPVITKEVKDRFCRLVQSGIEDGARLLLDGRDIVVPGYENGNFVGPTILSDVTTDMECYKEEFLGPVLLCMQADNLEEAISIVNRNKYFF | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3113643 | 3124959 | + | Cp4.1LG10g01640.1 | Cpe10g00532 | 476069 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00532 | 461 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 301 | 459 | IPR016163 | GO:0016620 | |
Cpe10g00532 | 461 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 326 | 337 | IPR016160 | GO:0016491 | |
Cpe10g00532 | 461 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 75 | 300 | IPR016162 | GO:0016491 | |
Cpe10g00532 | 461 | TIGRFAM | MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) | 58 | 459 | IPR010061 | GO:0004491 | |
Cpe10g00532 | 461 | Pfam | Aldehyde dehydrogenase family | 68 | 459 | IPR015590 | GO:0016491 | |
Cpe10g00532 | 461 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 22 | 459 | IPR010061 | GO:0004491 | |
Cpe10g00532 | 461 | PANTHER | METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE | 22 | 459 | - | - | |
Cpe10g00532 | 461 | SUPERFAMILY | ALDH-like | 50 | 459 | IPR016161 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00532 | Cpe-Chr10:3113643 | Cpe04g01139 | Cpe-Chr4:9800137 | 8.90E-46 | dispersed | |
Cpe10g00532 | Cpe-Chr10:3113643 | Cpe04g00361 | Cpe-Chr4:4234773 | 4.32E-52 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00532 | K00140 | - | csv:101207178 | 781.171 |