Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00589 ATGACGGGCAGAGGGTCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAATAATAAGAGGAGGGAGAGGCGTCGGAGGGCCATTGCTGCTAAGATCTACACTGGTCTTAGAGCTCAGGGGAACTATAAGCTTCCTAAACACTGTGATAACAACGAGGTCCTGAAGGCACTCTGTAATGAGGCTGGTTGGGTGGTTGAAGAAGATGGCACCACTTATCGCAAGGGAAGCAAGCCACCTCCGATTGATATTGGCACTACTGCAAACATGAGTGCCTGTTCCTCTCTTCAACCAAGCCCACAATCTTCCTGCTTCCCGAGTCCTGTACCATCCTACCATGCCAGTCCTTCCTCGTCCTCTTTTCCAAGCCCAACTCGATTTGATGGGAATCCATCTTCTTATCTTCTGCCATTCCTTCAAAATATATCATCTATACCTGCTAATCTCCCTCCTCTCAGAATATCAAACAGTGCACCTGTAACACCACCTCTCTCTTCCCCGACGTCAAGGGGTTCTAAGCGAAAACCAGACTGGGAGTCCATTCCAAATAGCTATGTAACCTCTTTCCGCCATCCATTCTTTGCTGTATCTGCTCCTTCAAGTCCAACAAGATGCCACCATCTTACACCGGCTACAATCCCAGAATGTGACGAGTCGGACGCTTCAACTGTGGACTCTGGTCGCTGGGTCAGCTTCCAGACTGTGGCACCTTCCGTGGCTCCTCCTTCCCCTACGTTTAATCTGATGAAACCAGTTAGTCAGCAAAACTCTCTCCATGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACCTCTGATAGGGGACGAGGCTCCGAGTTTGAATTTGAGAAATTTGAGAGTGGCGCGGTGAAGGCGTGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGACGACTTGGAGCTTACTCTTGGGGGTGGGAAGGCCCGTTGTTAA 960 50.62 MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGSKPPPIDIGTTANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPFFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLHDAVDRHGAMGWGATSDRGRGSEFEFEKFESGAVKAWEGERIHEVGVDDLELTLGGGKARC 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3457736 3460519 + Cp4.1LG10g01080.1 Cpe10g00589 476126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00589 319 MobiDBLite consensus disorder prediction 1 24 - -
Cpe10g00589 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 318 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cpe10g00589 319 MobiDBLite consensus disorder prediction 155 179 - -
Cpe10g00589 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 318 - -
Cpe10g00589 319 MobiDBLite consensus disorder prediction 155 171 - -
Cpe10g00589 319 MobiDBLite consensus disorder prediction 10 24 - -
Cpe10g00589 319 MobiDBLite consensus disorder prediction 87 109 - -
Cpe10g00589 319 MobiDBLite consensus disorder prediction 71 109 - -
Cpe10g00589 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00589 Cpe-Chr10:3457736 Cpe11g00187 Cpe-Chr11:1017927 1.44E-90 dispersed
Cpe10g00589 Cpe-Chr10:3457736 Cpe19g00793 Cpe-Chr19:5997709 0 wgd
Cpe10g00589 Cpe-Chr10:3457736 Cpe07g00438 Cpe-Chr7:2812803 7.39E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50126 PF05687 BES1_N 2.00E-63 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00589 K14503 - csv:101216171 563.533