Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00596 | ATGGGGACAGGGGAAGAGGGCACGCCTTCTAAAACTTCCAAGCCTCTCTCTTCATCTCAGGACATAGCTCCGGCACCTTCATATCCTGATTGGTCAAGCTCAATGCAGGCTTATTATGGTGCTGGTGCTACTCCACCTCCCTATTTTGCGTCTACTGTTGCTTCTCCAACTCCCCACCCTTACATTTGGGGAGGCCAGCATCCTTTGATGCCACCTTATGGGACTCCAGTTCCTTATCCAGCTATATATCCTCCTGGGGGAGTTTATGCCCACCCCAATATCACCGTGACTCCTGGCTCAGCACCAATTAATGCAGAATATGAAGGAAAGTCCCCGGATGGAAAAGAAAGGGCCTCAAAAAAATCCAAGGGCACGTCAGGAAATACTGGTTCAGGTGGTGGTAGGACCGGGGATAGTGGAAAGGTGGCTTCAAGTTCTGGAAATGATGGTGCTTCTCAAAGTGCTGATAGTGGTACTGAGGGGTCATCAGAAGGCAGTGACGAGAACGCTAACCAACATGAATTGTCTGCAAATAAGAAGGGAAGCTTCAACCAGATGCTGGCTGATGGAGCCAATGCACAAAACAACACGGGTGGACCAAATGCCAAATCTTCAGTAACTGGGAAACCCATCACCTCCATTCCTGGAACTAATCTGAACATGGGAATGGATTTGTGGAATAACACCACGGGTGCTTCAGGGGCTGGAAAAGTGAGAGCGAATGCCGTCTCCTCAGCCATTGGTCCAACACCGATGGTTGGTCGTGATGGTGTGATGCCTGAGCAATGGGTTCAAGACGAACGTGAGTTGAAAAGGCAGAAAAGGAAGCAATCTAACCGAGAGTCTGCCAGGAGGTCAAGATTACGCAAGCAGGCGGAGTGTGAAGAATTACAGGCGAGAGTGCAGACTTTGAACAACGAGAACCGTACTCTTAGGGATGAGCTGCAGAGGCTCTCCGAGGAATGTGAAAAGCTAACATCAGAAAATAGTTCCATCAAGGAAGAATTGACACGATTTTGTGGACCAGAAGCATTAGCTAACTTTGAAAAAGGAATCGCTGCTCCCGTTGCCCAATCTCGTGACGACGAGGGTAAGGACTAA | 1101 | 49.05 | MGTGEEGTPSKTSKPLSSSQDIAPAPSYPDWSSSMQAYYGAGATPPPYFASTVASPTPHPYIWGGQHPLMPPYGTPVPYPAIYPPGGVYAHPNITVTPGSAPINAEYEGKSPDGKERASKKSKGTSGNTGSGGGRTGDSGKVASSSGNDGASQSADSGTEGSSEGSDENANQHELSANKKGSFNQMLADGANAQNNTGGPNAKSSVTGKPITSIPGTNLNMGMDLWNNTTGASGAGKVRANAVSSAIGPTPMVGRDGVMPEQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGPEALANFEKGIAAPVAQSRDDEGKD | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3491811 | 3497548 | + | Cp4.1LG10g00830.1 | Cpe10g00596 | 476133 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00596 | 366 | Coils | Coil | 280 | 335 | - | - | |
Cpe10g00596 | 366 | MobiDBLite | consensus disorder prediction | 100 | 215 | - | - | |
Cpe10g00596 | 366 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 269 | 332 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe10g00596 | 366 | MobiDBLite | consensus disorder prediction | 266 | 292 | - | - | |
Cpe10g00596 | 366 | MobiDBLite | consensus disorder prediction | 123 | 215 | - | - | |
Cpe10g00596 | 366 | CDD | bZIP_plant_GBF1 | 272 | 322 | IPR045314 | GO:0003700|GO:0006355 | |
Cpe10g00596 | 366 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Cpe10g00596 | 366 | SUPERFAMILY | Leucine zipper domain | 270 | 326 | IPR046347 | GO:0003700|GO:0006355 | |
Cpe10g00596 | 366 | Pfam | bZIP transcription factor | 267 | 329 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe10g00596 | 366 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 364 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe10g00596 | 366 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 274 | 289 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe10g00596 | 366 | Gene3D | - | 270 | 325 | - | - | |
Cpe10g00596 | 366 | SMART | brlzneu | 267 | 331 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe10g00596 | 366 | Pfam | G-box binding protein MFMR | 1 | 94 | IPR012900 | - | |
Cpe10g00596 | 366 | PANTHER | G-BOX-BINDING FACTOR 1 | 1 | 364 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00596 | Cpe19g00799 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00154 | Cpe-Chr5:801123 | Cpe10g00596 | Cpe-Chr10:3491811 | 1.83E-60 | dispersed | |
Cpe08g00573 | Cpe-Chr8:3745256 | Cpe10g00596 | Cpe-Chr10:3491811 | 2.59E-52 | dispersed | |
Cpe10g00596 | Cpe-Chr10:3491811 | Cpe14g00989 | Cpe-Chr14:8347870 | 1.15E-59 | dispersed | |
Cpe10g00596 | Cpe-Chr10:3491811 | Cpe19g00799 | Cpe-Chr19:6026592 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50128 | PF07777 | MFMR | 6.70E-33 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00596 | K09060 | - | csv:101217128 | 645.195 |