Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00596 ATGGGGACAGGGGAAGAGGGCACGCCTTCTAAAACTTCCAAGCCTCTCTCTTCATCTCAGGACATAGCTCCGGCACCTTCATATCCTGATTGGTCAAGCTCAATGCAGGCTTATTATGGTGCTGGTGCTACTCCACCTCCCTATTTTGCGTCTACTGTTGCTTCTCCAACTCCCCACCCTTACATTTGGGGAGGCCAGCATCCTTTGATGCCACCTTATGGGACTCCAGTTCCTTATCCAGCTATATATCCTCCTGGGGGAGTTTATGCCCACCCCAATATCACCGTGACTCCTGGCTCAGCACCAATTAATGCAGAATATGAAGGAAAGTCCCCGGATGGAAAAGAAAGGGCCTCAAAAAAATCCAAGGGCACGTCAGGAAATACTGGTTCAGGTGGTGGTAGGACCGGGGATAGTGGAAAGGTGGCTTCAAGTTCTGGAAATGATGGTGCTTCTCAAAGTGCTGATAGTGGTACTGAGGGGTCATCAGAAGGCAGTGACGAGAACGCTAACCAACATGAATTGTCTGCAAATAAGAAGGGAAGCTTCAACCAGATGCTGGCTGATGGAGCCAATGCACAAAACAACACGGGTGGACCAAATGCCAAATCTTCAGTAACTGGGAAACCCATCACCTCCATTCCTGGAACTAATCTGAACATGGGAATGGATTTGTGGAATAACACCACGGGTGCTTCAGGGGCTGGAAAAGTGAGAGCGAATGCCGTCTCCTCAGCCATTGGTCCAACACCGATGGTTGGTCGTGATGGTGTGATGCCTGAGCAATGGGTTCAAGACGAACGTGAGTTGAAAAGGCAGAAAAGGAAGCAATCTAACCGAGAGTCTGCCAGGAGGTCAAGATTACGCAAGCAGGCGGAGTGTGAAGAATTACAGGCGAGAGTGCAGACTTTGAACAACGAGAACCGTACTCTTAGGGATGAGCTGCAGAGGCTCTCCGAGGAATGTGAAAAGCTAACATCAGAAAATAGTTCCATCAAGGAAGAATTGACACGATTTTGTGGACCAGAAGCATTAGCTAACTTTGAAAAAGGAATCGCTGCTCCCGTTGCCCAATCTCGTGACGACGAGGGTAAGGACTAA 1101 49.05 MGTGEEGTPSKTSKPLSSSQDIAPAPSYPDWSSSMQAYYGAGATPPPYFASTVASPTPHPYIWGGQHPLMPPYGTPVPYPAIYPPGGVYAHPNITVTPGSAPINAEYEGKSPDGKERASKKSKGTSGNTGSGGGRTGDSGKVASSSGNDGASQSADSGTEGSSEGSDENANQHELSANKKGSFNQMLADGANAQNNTGGPNAKSSVTGKPITSIPGTNLNMGMDLWNNTTGASGAGKVRANAVSSAIGPTPMVGRDGVMPEQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGPEALANFEKGIAAPVAQSRDDEGKD 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3491811 3497548 + Cp4.1LG10g00830.1 Cpe10g00596 476133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00596 366 Coils Coil 280 335 - -
Cpe10g00596 366 MobiDBLite consensus disorder prediction 100 215 - -
Cpe10g00596 366 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 269 332 IPR004827 GO:0003700|GO:0006355
Cpe10g00596 366 MobiDBLite consensus disorder prediction 266 292 - -
Cpe10g00596 366 MobiDBLite consensus disorder prediction 123 215 - -
Cpe10g00596 366 CDD bZIP_plant_GBF1 272 322 IPR045314 GO:0003700|GO:0006355
Cpe10g00596 366 MobiDBLite consensus disorder prediction 1 28 - -
Cpe10g00596 366 SUPERFAMILY Leucine zipper domain 270 326 IPR046347 GO:0003700|GO:0006355
Cpe10g00596 366 Pfam bZIP transcription factor 267 329 IPR004827 GO:0003700|GO:0006355
Cpe10g00596 366 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 364 IPR044827 GO:0003700|GO:0006355|GO:0043565
Cpe10g00596 366 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 274 289 IPR004827 GO:0003700|GO:0006355
Cpe10g00596 366 Gene3D - 270 325 - -
Cpe10g00596 366 SMART brlzneu 267 331 IPR004827 GO:0003700|GO:0006355
Cpe10g00596 366 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Cpe10g00596 366 PANTHER G-BOX-BINDING FACTOR 1 1 364 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00596 Cpe19g00799 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00154 Cpe-Chr5:801123 Cpe10g00596 Cpe-Chr10:3491811 1.83E-60 dispersed
Cpe08g00573 Cpe-Chr8:3745256 Cpe10g00596 Cpe-Chr10:3491811 2.59E-52 dispersed
Cpe10g00596 Cpe-Chr10:3491811 Cpe14g00989 Cpe-Chr14:8347870 1.15E-59 dispersed
Cpe10g00596 Cpe-Chr10:3491811 Cpe19g00799 Cpe-Chr19:6026592 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50128 PF07777 MFMR 6.70E-33 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00596 K09060 - csv:101217128 645.195