Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00605 ATGAGTGGTCCGTTGAGCTTTTTTGGTCCTTCAAAAGACTTAAATTTGAACTTCAAAGGCAAAGTGGGTAGTGAAAGTGAGGTCATCAACGATTTGGGGTTTGGGCTCTCCGGAGCTGGATTTCCCGACCCGTTTCAGGTTCAGAGAGTAGTCGACGGTGGAGATACGAGCTTTCAGTTTCCCAACTTGGAGCACCATTCTTCTGCTTTCAGATTTACCGATTTCGACGGCGGCGCTGCGGCAGAGTTCGACTCTGATGAGTGGATGGACAGTCTAATAGTGGGTGGAGATTCAACGGAGAGCTCTAATCTTCCTTCTGGTTGCGAAGCCTGGCAGTCTAATTCGGATTTTGCTTTCTATGGTGCCGATCCCTTTATCCCCTGTCCCAGTCGCCTCACTATCCCCTGTTCTTCACCCTCTGATCTTAACAGAGTCATTTTCCCTGACCCTCCCAAAAGTCAAACCGCCATTCAACCGCCGGTGGTCTCGTGGACGGGACTTACGTCGGCGACTCCGCCGGCGGTCGTCAAGGACACTCAAGTTCCGAACCCTCCCCTTATTGTTCACAAGAGTGAAGATAACGGCGGTTCGTCGAGTTCTGCAGAGACTGAATCGACTCCGCCGCTACTTAAAACCCTAATTGAATGTGCTCGACTTACCGAATCGGAGCCAGATCGAGCGGCGCAAATGTTGATTCAGCTTAAGGAATCGTCATCGGAGCACGGAGATCCAACGGAGAGAGTCGCCTTTTACTTTCTCGAAGCTCTGTGCCGGAGATTGTCACTTCGATCGGAGAATTGTTTGGTTTCTTGCGAATCCACTTCCGATGATTTCACTCTCTCTTATAAAGCTCTGAACGACGCTTGCCCGTATTCTAAATTCGCACATTTGACTGCGAATCAAGCCATACTCGAGATTACAGAGAACGCAAGCAGGATTCACATAATCGACTTTGGGATTTCACAGGGAGTCCAATGGGCGGCGCTTCTTCAAGCTCTCGCAACCCGCTCTACCGGAAAACCAACAGGAATTCGGATCTCCGGCATTCCGGCTCCGATGCTCGGGAACTGTCCGGCGACGGCGCTGTTCGCAACAGGTAACCGACTGGCCGAGTTCGCAAAGCTTCTGGAACTAAACTTCGAATTCGATCCAATTCTGACTCCAATCGAAGAATTGAACGAATCGTCGTTCCGAATCGAGTCGGAGGAATCCCTGGCCGTGAATTTCATGCTTCAATTATACAACCTCCTCGACGAAACTCCTCGCGCCGTTCTCAACGTTTTGAAACTGGCAAAATCGCTGAACCCTAAAATCGTGACGCTCGGGGAATACGAAGCCAGTCTAAACCGGGTCGGGTTCTTCACCCGGTTCAATAACGCACTGAGATATTACTCTGCCATTTTCGAATCACTGGACCCAAAATTACCTCGCGACTCAAACGAGAGGCTGCAACTGGAAAAGCTCGTGCTCGGGCGGCGAATCGGCGGCGTGGTGGGACCAGAGTCCTCGGCGACGGCGGCGGGAGGCAAAACGGAACGAATGGAAGAGAAAGAAGAGTGGAAAATGTTAATGGAAAACAGCGGATTTGAAGCAGTAAATCTGAGCCATTACGCGAGAAGCCAAGCTAAAATTCTTTTATGGAAGTACGATTACAGCTCTGAGTATTGTCTGATGGAATCCTCAGCTGGGTTCCTGTCGTTGGCATGGAAGGATGTCCCGATCATTACAGTTTCTTCATGGCGTTGA 1746 50.34 MSGPLSFFGPSKDLNLNFKGKVGSESEVINDLGFGLSGAGFPDPFQVQRVVDGGDTSFQFPNLEHHSSAFRFTDFDGGAAAEFDSDEWMDSLIVGGDSTESSNLPSGCEAWQSNSDFAFYGADPFIPCPSRLTIPCSSPSDLNRVIFPDPPKSQTAIQPPVVSWTGLTSATPPAVVKDTQVPNPPLIVHKSEDNGGSSSSAETESTPPLLKTLIECARLTESEPDRAAQMLIQLKESSSEHGDPTERVAFYFLEALCRRLSLRSENCLVSCESTSDDFTLSYKALNDACPYSKFAHLTANQAILEITENASRIHIIDFGISQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFRIESEESLAVNFMLQLYNLLDETPRAVLNVLKLAKSLNPKIVTLGEYEASLNRVGFFTRFNNALRYYSAIFESLDPKLPRDSNERLQLEKLVLGRRIGGVVGPESSATAAGGKTERMEEKEEWKMLMENSGFEAVNLSHYARSQAKILLWKYDYSSEYCLMESSAGFLSLAWKDVPIITVSSWR 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3534018 3537003 + Cp4.1LG10g00870.1 Cpe10g00605 476142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00605 581 Pfam GRAS domain family 210 581 IPR005202 -
Cpe10g00605 581 ProSiteProfiles GRAS family profile. 200 581 IPR005202 -
Cpe10g00605 581 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 210 580 - -
Cpe10g00605 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 210 580 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00605 Cpe14g00561 CCT
Cpe10g00605 Cpe19g00807 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00605 Cpe-Chr10:3534018 Cpe16g00391 Cpe-Chr16:5492187 4.77E-63 dispersed
Cpe01g00711 Cpe-Chr1:4141245 Cpe10g00605 Cpe-Chr10:3534018 0 wgd
Cpe10g00605 Cpe-Chr10:3534018 Cpe14g00561 Cpe-Chr14:3562009 0 wgd
Cpe10g00605 Cpe-Chr10:3534018 Cpe19g00807 Cpe-Chr19:6062922 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50131 PF03514 GRAS 3.00E-109 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00605 - - cmos:111453531 1058.9