Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00632 ATGTTGTGGAAGGAGGAGCTCGTGCTCTTAGCTCAAAACTATTTTGACACTACGACAGTGGCGGCAGTTCTTTCCATAGGTATTTTAGTGTTGGTTTCCAAAGTTTGCTGGAGACAGAGGAGCAAGAATGTTGGAGGAATTCCTGGTCACTTGGGGTTACCCTTTGTAGGGGAAACCTTCTCTTTTCTTTCTGCTAATAACAGCACCAGAGGGTGTTACCAATTTGTCAGGCTCCGCCGGTTATGGCATGGTAGGTGGTTCAGGACAAGGCTATTTGGAAAAATCCATGTGTTTGTTCCAAGTGCAGAAGGTGCAAAGGCAATACTTGCCAATGATTTTGTCCAATTCAACAAGGGATACGTGAAATCCATGGGAGATGCTGTTGGAGAGAAGAGTTTACTATGCGTTTCCCACGAGGACCACAGAAGGATTAGGCGTCTTCTAGCTGATCCTTTCTCCATGACTTCTCTGTCTAAGTTTGTCAAACAATTTGACGACATGCTCTCCAAAAGGCTACAGAAACTAGTAAAAGATGGGAAAAGTTTTGTACTGCTTGATTTCAGCATGAAGATAACATTCGATTCCATGTGCAATATGCTAATGAGTCTAAGAGATGAATCTACACTCAGGCAGATTGAAAAAGACTGTACAGCCGTCTCTGATGCCATGTTATCTTTCCCATTCATGATTCCAGGAACTAGGTACTACAAAGGCATCAAGGCACGAAACCGACTAATGGAAAGGTTAAGAGAAATAATATCCAGGCGACGGAGTGGAGAGGAGTCACCAGAAGACTTCCTGCAGTCAATGTTGCAGAGAGATTCGTATCCTCCGGATCAGAAGTTAGATGACTCAGAGATAATGGATAACCTTTTGACACTGATAATTGCAAGCCAAACTACCACAGCTGCTGCTATGACGTGGAGTGTCAAGTTCCTGGACGAGAACAGAGAGGCCCAAGAAAGGCTGCGGGAGGAACAGTTGTCAATTCTACGAAAGAAGGAAGATGGAGAACTACTTACTCTTGAAGATCTTAATAAAATGTCCTTTGGTTCAAAGGTCGTCAAAGAGACGTTGAGAATGTCCAATGTTTTGCTGTGGTTTCCTCGTGTGGCACTAGGGGATTGCAGATTAGAAGGTTTTGAAATAAAGAAAGGATGGCATGTGAACATCGATGCAACATGCATTCATTATGACCCAGATTTGTACAAGGACCCCATGCAATTCAACCCTTCGAGATTTGATGAAATTCAAAAGCCATACAGTTTCATACCTTTTGGATCTGGACCCAGGACCTGTCTCGGAATCAACATGGCCAAATTAACAATGTTGGTCTTTTTGCACAGGATGACTGGAGGGTACAGGTGGACGGTTGATGATCCAGATCCTTGCCTCGAAAAGAAGGCACATATCCCTAGGCTGAGAAGCGGCTGCCCCATTACTTTGAAGACCTTGAAAGATGGGACATAA 1470 43.88 MLWKEELVLLAQNYFDTTTVAAVLSIGILVLVSKVCWRQRSKNVGGIPGHLGLPFVGETFSFLSANNSTRGCYQFVRLRRLWHGRWFRTRLFGKIHVFVPSAEGAKAILANDFVQFNKGYVKSMGDAVGEKSLLCVSHEDHRRIRRLLADPFSMTSLSKFVKQFDDMLSKRLQKLVKDGKSFVLLDFSMKITFDSMCNMLMSLRDESTLRQIEKDCTAVSDAMLSFPFMIPGTRYYKGIKARNRLMERLREIISRRRSGEESPEDFLQSMLQRDSYPPDQKLDDSEIMDNLLTLIIASQTTTAAAMTWSVKFLDENREAQERLREEQLSILRKKEDGELLTLEDLNKMSFGSKVVKETLRMSNVLLWFPRVALGDCRLEGFEIKKGWHVNIDATCIHYDPDLYKDPMQFNPSRFDEIQKPYSFIPFGSGPRTCLGINMAKLTMLVFLHRMTGGYRWTVDDPDPCLEKKAHIPRLRSGCPITLKTLKDGT 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3646047 3648777 - Cp4.1LG10g00560.1 Cpe10g00632 476169

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00632 489 Gene3D Cytochrome P450 37 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 SUPERFAMILY Cytochrome P450 37 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Cpe10g00632 489 PANTHER CYTOCHROME P450 26 19 485 - -
Cpe10g00632 489 PANTHER CYTOCHROME P450 FAMILY PROTEIN 19 485 - -
Cpe10g00632 489 Pfam Cytochrome P450 49 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe10g00632 489 Coils Coil 316 336 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00632 - - - cmax:111478438 934.095
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00632 Cpe-Chr10:3646047 Cpe17g00293 Cpe-Chr17:1987655 6.46E-63 dispersed
Cpe02g00890 Cpe-Chr2:6344525 Cpe10g00632 Cpe-Chr10:3646047 8.60E-99 transposed
Cpe10g00632 Cpe-Chr10:3646047 Cpe07g00404 Cpe-Chr7:2633632 6.91E-104 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1026 . . . . . . . . . . Cma03g00726 . Car03g00664 . Sed11g1049 . Cpe10g00632 Bhi03g00926 Tan03g2013 Cmetu03g0864 . Hepe04g1544 . . Cla01g01935 Cam01g2019 Cec04g1677 Cco04g1741 Clacu01g2040 Cmu01g1916 Cre04g1592 . . . . Lsi01g00654 . . Cme08g00877 . . . . . . . . . Cmo03g00751 . . . . . . . . . . . . . . . . . . . . . . Csa06g03271 Chy02g00621 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013553 0 2 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 26
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe10g00632 Cpe_Chr10 FPKM 2.415534 2.614138 3.583077 3.775026 47.357929 42.944271 47.523888 2.538546 1.948442 2.245023