Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00638 ATGCCATCAGAACTCGGTTCAGTCGAAAACCCTAGAAAATGGCGCTTCACATGGGAAGCGCAATCGCATATACCAACCCTACGTTTATTGCTCTTCGATTCCTATACCAATCCTTCTCTTCAATGTCAGAATCTCAAGGTTCATCTCAATCTCCAGCAGTCCGTAGTTTGTGTGGCTTGGTTACAAGACCTCGAAATGTCCATTCGAGTTCCTATGCCTCCGGTTTTGGTTGACGCTGAGTCGCCTCTGAGTTTTAGAGCTTTCGAAGACCATATTGAGGTTAAGCTTGTCTTGCTTCTTCCGGTTGATCACCCTATCATTCTTAACTTCGACAATGTGCTGGACTTCTCCGAAACGCGAGGACATAGCAACTCCAAGGCGTTGAAGCCACTTTCAATGGATTATGATCAAAGCAGTTTATCACGCAGTGGTGGCGTCCACTTTTATTGCAGAAATTGTTCTTTCAGGCTGAGTGAATCCCCTCTCAGAAATTTTGTTGAAATGCCATCAGTCAACTGGCGAGAGGTGGCTGATAACTGGTTTGGGACTTGCTGCTGCTCCTTCGGGGGGATAAGCGAGAAGCTGGTTACTAGGTACACAAATTCCTATAGATGTGCAAAGGGTGTCTGCCTACTCACTTTAACGACTATTACTCTTTCCAAGGATGACCTTATTGGACATGTGTTCCCAGACTATGATGGGACCCGAGAACTCAAGGATGAATCAGATTTCACTGATGGCAATTGGTTAACTGAAGCTAAGCAAGAATCACAATGTAATCATACATCTACAGAGGAGGTAAAATCTAAGCAGTTCAATTATAAGAACCTTGTTGCAAAGACGGAGGGTAATGCTGCTGTGAAGGGAAGCGATGAAGTTGATTCACCTCTTGTGACTTCAATTCCTGACTTACATCAACATGGAGAAAGTAATGTACTTCATGATCTTGATAGAGATTGCATGCATCACACATGTGGCACATATGAGTTAGACCCAAAGCCTATTAATACTGTAGATGTTTCGGACGATCAAAGATCCTTTCTTAATGGTTTTCTTGGAAATATCTTTATGGCTAGACTGTCAAATCTTTCAGCAGATTTTGAATGGGCTGAGTTCTTTTGCCCCCAGTGTTCAACTCTGATTGGGGCTTACCCTTGCAGAAATGGCTGTGGACCTACAGATGGTGGAGTTCGACTCTTTAAATGTTATGTCTCAACATGTTTATCAACTGAATCAGAAAATTTGTTCAGATTAGCCGACTTATGCAACAGGGACTACACGTTGGAAAAAATGTTTGCATCTCAGCTACTGGAAAGTGCAAATGAAGAATCATCATTTCGTACCGTGGTTAAGGAGTTGAAAACCAAGTCTGCCATGCTGCACATTGTTCTCATCAATTCAAATTCTTGGTCGTGTAGTGGTTATTGTTTGGGCATGGAGGATACTGCAGAAGTTGTTCCAAAGGTGGATTTAAATCCAATCATCAAGGTGCTATTCTCAGATTGCAACAAAAGTGCGGAATCTCACCTAAGGAAACTTGAAGAGTGGGTGACAAAAGATATAGCAGAAGAAGTTTTTATGTTAGCCCATCAAATAGAGGAATTAAATGAAATCCTAGTTTCAAGAAATGATACACTTCCATCTTCATGTTCTTCCCTTGATGGTTTAACTTTGACATCTATTCTGAGGTAA 1692 41.78 MPSELGSVENPRKWRFTWEAQSHIPTLRLLLFDSYTNPSLQCQNLKVHLNLQQSVVCVAWLQDLEMSIRVPMPPVLVDAESPLSFRAFEDHIEVKLVLLLPVDHPIILNFDNVLDFSETRGHSNSKALKPLSMDYDQSSLSRSGGVHFYCRNCSFRLSESPLRNFVEMPSVNWREVADNWFGTCCCSFGGISEKLVTRYTNSYRCAKGVCLLTLTTITLSKDDLIGHVFPDYDGTRELKDESDFTDGNWLTEAKQESQCNHTSTEEVKSKQFNYKNLVAKTEGNAAVKGSDEVDSPLVTSIPDLHQHGESNVLHDLDRDCMHHTCGTYELDPKPINTVDVSDDQRSFLNGFLGNIFMARLSNLSADFEWAEFFCPQCSTLIGAYPCRNGCGPTDGGVRLFKCYVSTCLSTESENLFRLADLCNRDYTLEKMFASQLLESANEESSFRTVVKELKTKSAMLHIVLINSNSWSCSGYCLGMEDTAEVVPKVDLNPIIKVLFSDCNKSAESHLRKLEEWVTKDIAEEVFMLAHQIEELNEILVSRNDTLPSSCSSLDGLTLTSILR 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3671808 3674919 + Cp4.1LG10g00410.1 Cpe10g00638 476175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00638 563 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 121 551 IPR019193 -
Cpe10g00638 563 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 15 558 IPR019193 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00638 Cpe14g00538 CCT
Cpe10g00638 Cpe14g00538 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00638 - - csv:101204887 988.023