Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00649 | ATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTCTGTTTTGTGCAGCTGACGAGGCTGCTCTCTGCACAGCCTGCGATGCAAAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAAAATGCACCAGCTTTCTTTTGGTGTGAGATAGACGGGAGTTCCTTGTGTTTACAATGCGATGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCCCAAATGCAAAGCCGGTGGAACAGGTTGAGACAGTGAGAGGCCAAAATCAAGAAAGGGGTGAGGAGATTGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGCGTTAAAGGGTATTCAAATGGAGATAGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAG | 510 | 46.86 | MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPVEQVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI | 169 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3738125 | 3738859 | - | Cp4.1LG10g00390.1 | Cpe10g00649 | 476186 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00649 | 169 | CDD | Bbox1_BBX-like | 4 | 47 | - | - | |
Cpe10g00649 | 169 | PANTHER | B-BOX ZINC FINGER PROTEIN 19 | 1 | 168 | - | - | |
Cpe10g00649 | 169 | SMART | bboxneu5 | 51 | 96 | IPR000315 | GO:0008270 | |
Cpe10g00649 | 169 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
Cpe10g00649 | 169 | Pfam | B-box zinc finger | 52 | 85 | IPR000315 | GO:0008270 | |
Cpe10g00649 | 169 | Pfam | B-box zinc finger | 4 | 42 | IPR000315 | GO:0008270 | |
Cpe10g00649 | 169 | MobiDBLite | consensus disorder prediction | 127 | 145 | - | - | |
Cpe10g00649 | 169 | Gene3D | Classic Zinc Finger | 1 | 93 | - | - | |
Cpe10g00649 | 169 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 168 | - | - | |
Cpe10g00649 | 169 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Cpe10g00649 | 169 | MobiDBLite | consensus disorder prediction | 105 | 169 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00649 | Cpe19g00845 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00702 | Cpe-Chr1:4064921 | Cpe10g00649 | Cpe-Chr10:3738125 | 3.48E-72 | dispersed | |
Cpe10g00649 | Cpe-Chr10:3738125 | Cpe17g01088 | Cpe-Chr17:8252826 | 7.88E-26 | dispersed | |
Cpe18g00605 | Cpe-Chr18:6389288 | Cpe10g00649 | Cpe-Chr10:3738125 | 5.64E-08 | dispersed | |
Cpe10g00649 | Cpe-Chr10:3738125 | Cpe11g00234 | Cpe-Chr11:1265779 | 3.53E-23 | wgd | |
Cpe10g00649 | Cpe-Chr10:3738125 | Cpe14g00516 | Cpe-Chr14:3264555 | 1.48E-69 | wgd | |
Cpe10g00649 | Cpe-Chr10:3738125 | Cpe16g00269 | Cpe-Chr16:4700975 | 7.48E-20 | wgd | |
Cpe10g00649 | Cpe-Chr10:3738125 | Cpe19g00845 | Cpe-Chr19:6255132 | 1.04E-77 | wgd | |
Cpe10g00649 | Cpe-Chr10:3738125 | Cpe02g00094 | Cpe-Chr2:475486 | 2.23E-20 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50137 | PF00643 | zf-B_box | 9.70E-06 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00649 | - | - | csv:101206016 | 286.96 |