Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00649 ATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTCTGTTTTGTGCAGCTGACGAGGCTGCTCTCTGCACAGCCTGCGATGCAAAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAAAATGCACCAGCTTTCTTTTGGTGTGAGATAGACGGGAGTTCCTTGTGTTTACAATGCGATGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCCCAAATGCAAAGCCGGTGGAACAGGTTGAGACAGTGAGAGGCCAAAATCAAGAAAGGGGTGAGGAGATTGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGCGTTAAAGGGTATTCAAATGGAGATAGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAG 510 46.86 MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPVEQVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3738125 3738859 - Cp4.1LG10g00390.1 Cpe10g00649 476186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00649 169 CDD Bbox1_BBX-like 4 47 - -
Cpe10g00649 169 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 168 - -
Cpe10g00649 169 SMART bboxneu5 51 96 IPR000315 GO:0008270
Cpe10g00649 169 SMART bboxneu5 4 47 IPR000315 GO:0008270
Cpe10g00649 169 Pfam B-box zinc finger 52 85 IPR000315 GO:0008270
Cpe10g00649 169 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Cpe10g00649 169 MobiDBLite consensus disorder prediction 127 145 - -
Cpe10g00649 169 Gene3D Classic Zinc Finger 1 93 - -
Cpe10g00649 169 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 168 - -
Cpe10g00649 169 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Cpe10g00649 169 MobiDBLite consensus disorder prediction 105 169 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00649 Cpe19g00845 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00702 Cpe-Chr1:4064921 Cpe10g00649 Cpe-Chr10:3738125 3.48E-72 dispersed
Cpe10g00649 Cpe-Chr10:3738125 Cpe17g01088 Cpe-Chr17:8252826 7.88E-26 dispersed
Cpe18g00605 Cpe-Chr18:6389288 Cpe10g00649 Cpe-Chr10:3738125 5.64E-08 dispersed
Cpe10g00649 Cpe-Chr10:3738125 Cpe11g00234 Cpe-Chr11:1265779 3.53E-23 wgd
Cpe10g00649 Cpe-Chr10:3738125 Cpe14g00516 Cpe-Chr14:3264555 1.48E-69 wgd
Cpe10g00649 Cpe-Chr10:3738125 Cpe16g00269 Cpe-Chr16:4700975 7.48E-20 wgd
Cpe10g00649 Cpe-Chr10:3738125 Cpe19g00845 Cpe-Chr19:6255132 1.04E-77 wgd
Cpe10g00649 Cpe-Chr10:3738125 Cpe02g00094 Cpe-Chr2:475486 2.23E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50137 PF00643 zf-B_box 9.70E-06 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00649 - - csv:101206016 286.96