Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00685 TCTGGAGGCCCAACATGGGATGTTCCCAAAGGGAGAAAGGATGGAAGGATATCAAAGGCTAGTGAAACAATACAATTGCCATCTCCAAGGTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGATTATCCTTGGACGACCTAGTGGCTCTTTCAGGAGCACACACCTTGGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATTCGCAACTTCTGTCCAGCCAGCAACGTCGACCCTGAGATGAATCCGTCCTTTGCAGCAAGTCTAAGAAACACATGCCCAGTAAACAACAAGGCTAAAAGTGCTGGTGCTTACATGGATACTTCATCAACCACATTTGACAACAATTATTATAGGCTGATACTCCAAAAGAAGGCCCTGTTTTCTTCTGACCAAGCTCTGCTAAACTTTCCTAAGACCAAGAATCTTGTTTATAAGTTTGCAAGTTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAAGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA 558 43.19 SGGPTWDVPKGRKDGRISKASETIQLPSPRFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFCPASNVDPEMNPSFAASLRNTCPVNNKAKSAGAYMDTSSTTFDNNYYRLILQKKALFSSDQALLNFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3937680 3938385 - Cp4.1LG10g00060.1 Cpe10g00685 476222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00685 185 ProSitePatterns Peroxidases proximal heme-ligand signature. 49 59 IPR019793 -
Cpe10g00685 185 PANTHER PEROXIDASE 25-RELATED 1 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Plant peroxidase signature 163 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Plant peroxidase signature 48 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Plant peroxidase signature 123 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Plant peroxidase signature 2 17 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PANTHER PEROXIDASE 1 184 - -
Cpe10g00685 185 Gene3D Peroxidase, domain 2 27 168 - -
Cpe10g00685 185 Gene3D - 1 185 - -
Cpe10g00685 185 Pfam Peroxidase 1 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 ProSiteProfiles Plant heme peroxidase family profile. 1 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Haem peroxidase superfamily signature 49 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Haem peroxidase superfamily signature 2 14 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 PRINTS Haem peroxidase superfamily signature 109 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe10g00685 185 SUPERFAMILY Heme-dependent peroxidases 2 185 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00685 Cpe-Chr10:3937680 Cpe19g00661 Cpe-Chr19:5296903 4.49E-45 dispersed
Cpe10g00685 Cpe-Chr10:3937680 Cpe19g00876 Cpe-Chr19:6426026 3.66E-125 wgd
Cpe10g00685 Cpe-Chr10:3937680 Cpe07g00349 Cpe-Chr7:2261224 5.50E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00685 K00430 - csv:101217954 345.125