Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00688 ATGCAATTACAGGAGCCGATTGAGGAGTTTTGCTGCTTTGAATTCTTGATGAACTTTCTGAGGGCTTGCTGGCTGCCATCCTCGGCCAATATCGTACACAGCGGTTCGGATTCAGCAGGTCGTCGTGAAGGCTTACTATGGTACAAGGATATTGGACAGCACATGAATGGTGAATTTTCAATGGCTGTTGTCCAGGCTAATAACTTGCTTGAGGATCAAAGCCAGATCGAATCGGGTTCATTGAGCTTGGTCGAATCCGGGCCATATGGAACCTTTATTGGTGTTTATGATGGTCATGGTGGACCGGAAGCATCAAATTACATATATGATAATCTTTTCCAGCATCTAAAAAGGTTCACCTCAGAACAACAATCAATGTCATCTGATGTGATAAAGAAAGCATTTCAAGCTACAGAGGAAGGGTTCATTTCTTTAGTGACTAAACAATGGCAAATGAAGCCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCCGTGCTTGGAAGGGTCATGCGTGCAACGGAGGAGGTTATCGCCGTGCAGCTATCAGCTGAGCATAATGTGAGCATAGAATCTGTCAGAAGGGAGATGCATTCTCTGCACCCAGATGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTA 723 45.37 MQLQEPIEEFCCFEFLMNFLRACWLPSSANIVHSGSDSAGRREGLLWYKDIGQHMNGEFSMAVVQANNLLEDQSQIESGSLSLVESGPYGTFIGVYDGHGGPEASNYIYDNLFQHLKRFTSEQQSMSSDVIKKAFQATEEGFISLVTKQWQMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVMRATEEVIAVQLSAEHNVSIESVRREMHSLHPDDSHIVVLKHNVWRVKGLIQV 241
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 3957063 3958166 + Cp4.1LG10g00130.1 Cpe10g00688 476225
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00688 241 PANTHER ALPHABET, ISOFORM E-RELATED 16 241 - -
Cpe10g00688 241 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Cpe10g00688 241 Gene3D - 48 241 IPR036457 -
Cpe10g00688 241 SMART PP2C_4 52 241 IPR001932 -
Cpe10g00688 241 CDD PP2Cc 59 241 IPR001932 -
Cpe10g00688 241 SUPERFAMILY PP2C-like 67 240 IPR036457 -
Cpe10g00688 241 Pfam Protein phosphatase 2C 91 208 IPR001932 -
Cpe10g00688 241 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 16 241 - -
Cpe10g00688 241 ProSiteProfiles PPM-type phosphatase domain profile. 58 241 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00222 Cpe-Chr1:1248672 Cpe10g00688 Cpe-Chr10:3957063 5.52E-106 dispersed
Cpe01g01128 Cpe-Chr1:6676303 Cpe10g00688 Cpe-Chr10:3957063 1.67E-105 dispersed
Cpe03g00147 Cpe-Chr3:742758 Cpe10g00688 Cpe-Chr10:3957063 9.64E-106 dispersed
Cpe05g01363 Cpe-Chr5:9586872 Cpe10g00688 Cpe-Chr10:3957063 1.88E-138 dispersed
Cpe08g01134 Cpe-Chr8:8492012 Cpe10g00688 Cpe-Chr10:3957063 4.68E-105 dispersed
Cpe10g00688 Cpe-Chr10:3957063 Cpe15g00605 Cpe-Chr15:6773776 8.60E-129 dispersed
Cpe03g00369 Cpe-Chr3:1980533 Cpe10g00688 Cpe-Chr10:3957063 6.99E-81 transposed
Cpe11g00098 Cpe-Chr11:526743 Cpe10g00688 Cpe-Chr10:3957063 8.78E-82 transposed
Cpe10g00688 Cpe-Chr10:3957063 Cpe14g01040 Cpe-Chr14:8734462 4.36E-119 wgd
Cpe10g00688 Cpe-Chr10:3957063 Cpe16g00325 Cpe-Chr16:5096653 7.62E-114 wgd
Cpe10g00688 Cpe-Chr10:3957063 Cpe19g00880 Cpe-Chr19:6451702 8.08E-157 wgd
Cpe10g00688 Cpe-Chr10:3957063 Cpe08g01306 Cpe-Chr8:9397628 4.43E-73 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00688 K01102 - csv:101219696 434.106