Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00694 ATGGCGGAAAGTTCAGAAGAGGTCTATCTCCATGGCGATCTCGACCTTAAAATCTTCGAGGCCACCCAGTTGCCTAACATGGACATAGTATCCGAGCGTCTACGTCGTTGCTTCACCGCTTGTGGTACTCTCAACTACTCCGCTATTAAATCCGTCGCTACCAACTCACGTTCCGCCGCCGGTGAAGGGAAAGTCCACCGCAGCCATGGAAAAATCATCACCAGTGACCCATATGTTACCGTCCGGGTTCCTCAAGCCACCGTCGCGCGAACTCGCGTTATTAAGAATACCCAAAACCCCAATTGGAACGAGCATTTCGTTATCCCTCTTGCACAGAAAATGGCTGAGTTGGAATTTCAGGTGAAGGACGATGATGTCTTTGGCGCTGAAGTTATGGGGACAGTCAAAATCCCGGCTCAGCAAATTGCCTCTGGTCAGACAATTAGTGGGTGGTTTACGGTGCTTGGCTCAAATGGGAAGCCACCGAAGCCCGGCACTTCACTACGAATTGAAATGAAGTTCACCCCTGTTGAGAAGAATCCGGTGTACCGCCACGGCATTGCTGGAGATCCGGAGCATAAGGGTGTGCGGCACACATATTTTCCGGTGAGGAGAGGCAGCTCCATGAGATTGTACCAAGATGCTCATGTGCCTGATGGGATGCTGCCGGTGATTGAATTGGATGGAAAGAATGTTTATAAACAAGAGAATTGTTGGGAGGATATCTGTCATGCTATATCAGAGGCTCATCATATGATTTATATCGTTGGTTGGTCAGTTTTTCATAAGATCAAGCTGGGGGGATTGATGCAGACACACGACGAGGAAACCAAGAAATTTTTCAAGCATTCTTCAGTGATCTGTGTGCTCTCACCTCGCTATCCAAGCAGCAAGCTAAGCTATGTGAAACAAAAGGTTGTAGGCACTGTCTTCACGCATCATCAGAAATGTGTCCTTGTTGATACTCAAGGATATGGTAATAATAGGAAGATCACAGCTTTTCTTGGAGGTCTTGATCTCTGTGACGGTCGTTACGATACACCCGAGCATCGACTATTCCATGGCCTCGACACGGTATTTAAGGATGATTTTCATAATCCTACATTCCCTGGAGCCAAAGCTCCAAGGCAACCATGGCATGACTTGCACTGTCGGATCGATGGGCCAGCTGCATATGACGTGCTTATAAACTTCGAGCAACGTTGGAGCCGAGCCACAAGATGGACCGAGTTTGGTCTACGCTGCAGGAACATTACTCACTGGCGCGATGCTTTAATCAAGATAGAGCGCATATCATGGATACTAAGCCCTGAAATAACCATCTTAGCTGATGGTTCAATAAAAGTTCCAGAGGATGACCCCAAAGTATATGTTTCAAACGAAAAAGATCCTGAAAACTGGCATGTTCAGATTTTTCGATCCATCGACTCAGGATCGGTTAAAGGATTCCCAAGAGATGTCCATGTCGCCGAGTCGCAGAACCTTGTATGTGCCAAAAACTTGGCTATAGAGAAAAGCATTGAAATGGCATATATCCAGGCTATCCGATCGGCGCAACGTTTCATTTACATCGAAAACCAGTATTTTATAGGATCATCGTATGGATGGCCGGGATATAAAAATGCCGGGGCTGATAATCTCATTCCCATGGAGTTGGCCCTTAAGATTGCAAGCAAAATAAGAGCCAATGAAAGATTTGTTGTGTATATTGTCATACCAATGTGGCCTGAGGGAGATCCCAATAGCGCTCCCATGCAAGAGATTCTTTATTGGCAGGGACAAACCATGCAAATGATGTATGACATTGTTGGAAGTGAGTTGAAATCATCAGAGCAACCATATTTGCACCCTCAGGACTATCTAAACTTCTATTGCCTTGGCAAACGGGAAAAAGTTCCAGAGAATGGGCCAACCACTGATGCAACGGTATCAAATTCAATAAAACATCAACGGTTTATGATTTACGTGCATGCCAAGGGGATGATAGTAGATGATGAATATGTAATTATTGGGTCTGCAAATATTAACCAACGATCTATGGCTGGAACGAAGGACACCGAGATAGCCACGGGCGCGTATCAGCCACATCACACGTGGGCGAAGAAAAAGAAACACCCACATGGTCAGCATCTCGGAATGCTCGATCCATGTTTCAACGAGCCAGAAACTTTGGAATGTGTAAGAAGAGTCAACGGGGTAGCAGAGGATAACTGGAAGCGATTCACCGCCGATGAATTCACGACGTTGCAAGGCCACCTCCTCCGGTATCCGGTGCTCGTGGATGGCGATGGGAGAGTCAGCCCTCTGCCTGGACATGAAAACTTCCCTGATGTAGGAGGGAAGATAATAGGATCTCATTCAGCTGCAATTCCTGATGTTTTGACCACATAG 2391 46.47 MAESSEEVYLHGDLDLKIFEATQLPNMDIVSERLRRCFTACGTLNYSAIKSVATNSRSAAGEGKVHRSHGKIITSDPYVTVRVPQATVARTRVIKNTQNPNWNEHFVIPLAQKMAELEFQVKDDDVFGAEVMGTVKIPAQQIASGQTISGWFTVLGSNGKPPKPGTSLRIEMKFTPVEKNPVYRHGIAGDPEHKGVRHTYFPVRRGSSMRLYQDAHVPDGMLPVIELDGKNVYKQENCWEDICHAISEAHHMIYIVGWSVFHKIKLGGLMQTHDEETKKFFKHSSVICVLSPRYPSSKLSYVKQKVVGTVFTHHQKCVLVDTQGYGNNRKITAFLGGLDLCDGRYDTPEHRLFHGLDTVFKDDFHNPTFPGAKAPRQPWHDLHCRIDGPAAYDVLINFEQRWSRATRWTEFGLRCRNITHWRDALIKIERISWILSPEITILADGSIKVPEDDPKVYVSNEKDPENWHVQIFRSIDSGSVKGFPRDVHVAESQNLVCAKNLAIEKSIEMAYIQAIRSAQRFIYIENQYFIGSSYGWPGYKNAGADNLIPMELALKIASKIRANERFVVYIVIPMWPEGDPNSAPMQEILYWQGQTMQMMYDIVGSELKSSEQPYLHPQDYLNFYCLGKREKVPENGPTTDATVSNSIKHQRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIATGAYQPHHTWAKKKKHPHGQHLGMLDPCFNEPETLECVRRVNGVAEDNWKRFTADEFTTLQGHLLRYPVLVDGDGRVSPLPGHENFPDVGGKIIGSHSAAIPDVLTT 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3992957 3998762 + Cp4.1LG10g10550.1 Cpe10g00694 476231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00694 796 Gene3D C2 domain 11 184 IPR035892 -
Cpe10g00694 796 Pfam Phospholipase D C terminal 716 785 IPR024632 -
Cpe10g00694 796 Gene3D Endonuclease Chain A 469 701 - -
Cpe10g00694 796 PANTHER PHOSPHOLIPASE D DELTA 5 266 - -
Cpe10g00694 796 PANTHER PHOSPHOLIPASE D DELTA 268 796 - -
Cpe10g00694 796 SMART pld_4 309 344 IPR001736 GO:0003824
Cpe10g00694 796 SMART pld_4 652 679 IPR001736 GO:0003824
Cpe10g00694 796 PIRSF PLD_plant 265 796 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe10g00694 796 PIRSF PLD_plant 1 267 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe10g00694 796 Gene3D Endonuclease Chain A 226 417 - -
Cpe10g00694 796 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 309 344 IPR001736 GO:0003824
Cpe10g00694 796 Pfam Phospholipase D Active site motif 309 344 IPR001736 GO:0003824
Cpe10g00694 796 Pfam Phospholipase D Active site motif 653 679 IPR001736 GO:0003824
Cpe10g00694 796 PANTHER PHOSPHOLIPASE D 268 796 IPR015679 -
Cpe10g00694 796 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 177 IPR035892 -
Cpe10g00694 796 SUPERFAMILY Phospholipase D/nuclease 504 687 - -
Cpe10g00694 796 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 652 679 IPR001736 GO:0003824
Cpe10g00694 796 SMART C2_3c 13 151 IPR000008 -
Cpe10g00694 796 CDD C2_plant_PLD 8 175 - -
Cpe10g00694 796 PANTHER PHOSPHOLIPASE D 5 266 IPR015679 -
Cpe10g00694 796 SUPERFAMILY Phospholipase D/nuclease 209 410 - -
Cpe10g00694 796 Pfam C2 domain 12 153 IPR000008 -
Cpe10g00694 796 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00694 Cpe-Chr10:3992957 Cpe12g00003 Cpe-Chr12:10623 0 dispersed
Cpe10g00694 Cpe-Chr10:3992957 Cpe11g00275 Cpe-Chr11:1476758 0 wgd
Cpe10g00694 Cpe-Chr10:3992957 Cpe19g00883 Cpe-Chr19:6467980 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00694 K01115 - csv:101217251 1458.74