Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00717 ATGAGGGTTATTTGCCTTCTAGTATTGATGCTTCTCTTCAATGGGAGTTCCTCAATTGGAGATAGCAAAAATGTATCCATGAGACCTGATGTTGTCGACATTGGGGCTTTATTCTCTTTCAGTTCTATGATCGGCAGAGTTGGAAAAATTGCCGTGGAAGCTGCGGTCGAGGATGTAAATTCCGATCCATCCATCTTGGGGGGGACGAAGCTGAAGCTCAGTTTACATGATACCAATTACAGTGGATTCTTGGGCATCATTGAATCCTTGCGTTTCATGGAGACTAAGACTTTGGCCATAATTGGACCACAAAACTCTGTGACTGCTCATGTTTTATCTCATATTGCGAACGAGCTCCAAGTCCCTTTATTGTCGTTTTCGGCTACAGATCCCACACTGTCATCACTTCAGTTTCCTTTCTTTATTAGAACTTCACAGAATGATCTGTATCAGATGGCTGCCGTAGCTGATATAGTTGATTACTTTCAATGGAGACAAGTGATTGCCATCTTTGTTGATGATGACCATGGTAGAAATGTACCATTGAAGCCTGATGCAAGTCGAGACGAGGTCACTGATGCACTTGTTAAGGTGGCTTTATCAGAGTCTCGGATACTCGTTGTTCATACTTATGAGACCACAGGTATGGTGGTGCTCGATGTGGCACGATCTCTTGGAATGACAGAACCTGGGTATGTATGGATAGCTACTAACTGGCTTTCTTTACTACTCGACACAAATTCTCCTCTACCTTCTTCTTCTATGGAAAATATTCAAGGACTTGTTGCTTTGCGTCTTTATTCACCAGATTCTGCACTGAAGAGGAGTTTTGTTTCAAGGTGGACTAATTTGACTAATGGAAAGGCATCAAGCGGTCCGCTCGGGTTGAGTACGTATGGATTATATGCTTACGATACGGTTTGGATGCTGGCTCATGCAATAAACGCATTTCTTAATGAAGGTGGAGATCTTTCATTTTCAAAACTTTCCAAGTTAACTGGAACTGATGTTGGAACTTTGAATTTCAACTCTATGAGTATCTTCAATGGTGGGAAGACACTACTTCATAGAATTTTAGACGTCAAGTTTACTGGAATAACAGGTCGAGTTGAGTTCACTCCAGATAGGGACATAATCCGCCCTGCATTCGAAGTGATCAATATAATCGGCACGGGAGAGAGGAGAATTGGTTATTGGTCTAACTATTCTGGTTTGTCAACTGTGCCTCCTGAAAGCCTTTACTCGAAACCACCTAACCGAACCAGTTCTAATCAAAAGCTATATGATGTGGTATGGCCTGGACAAGCAACACAGAAGCCTCGTGGATGGGCATTTCCAAACAGTGGAAGACGATTGAGAATCGGAGTCCCGAGACGAGTAGGTTATCAAGAATTTGTCTCACAAGTAGAAGGAACCGACATGTTCCGAGGCTACTGCGTCGATGTCTTTACTGCAGCAATCAACTTGTTGCCTTATGCAGTCCCCTATAAGTTAATTCCATTTGGAGATGGCCTTACTAATCCTAGTGTAACCGAACTTGTTCGTCTACTCACAACTGGGGTCTTTGATGCAGCTATAGGTGACATTGCAATTATCACGAACCGAACCAGGATGGCCGACTTTACGCAGCCATACATCGAGTCTGGCTTAGTAATCGTAGCCCCGGTCAAGAAGTTGAACTCTAATGCTTGGGCTTTTTTACGGCCATTCACCCCGAAGATGTGGTGCATTACTGCTGTGTCTTTTCTTGTAATAGGAGCAGTTGTTTGGATTTTAGAGCATCGGATAAATGACGATTTTCGGGGGCCTCCGAAGCAACAAATCATTACTATTCTATGGTTCAGCTTTTCAACTCTGTTCTTCTCTCATCGGGAAAACACCGTCAGTACCCTCGGTCGAATCGTGCTGCTCGTATGGTTATTTGTTGTTCTAATTATCAACTCGAGCTACACTGCAAGCTTGACCTCTATCCTCACAGTTCAACAACTTTCTTCTCCTGTCAAAGGGATTGAAACTTTGATTTCAAACAATGACCCAATTGGCTATCAGCAGGGTTCATTTGCTCGAAACTACTTGATCGAGGAACTTGGCATTCATGAGTCGAGACTCGTTCCACTCGTCTCAACAGAACACTATGTCAAAGCGTTGAATGACGGGCCAACGAATAACGGTGTTGCTGCTATTATCGACGAGCGAGCATATGTAGAGCTCTTCCTTTCGACCCGTTGCGAATACAGCATTGTTGGCCAAGAGTTCACCAAAAATGGGTGGGGATTTGCTTTCCAGCGCGACTCTCCTTTAGCAGTTGACATGTCCACAGCTATTCTTAGACTCTCCGAAAATGGTGATCTTCAAAGGATCCATGACAAATGGTTAATGAAAAGTGCCTGTACATCACAAGCCTCGAAATTCGAGGTGGATCGACTTCAGCTCGGTAGCTTTTGGGGACTTTTTCTAATATCTGGATTAGCCTGCTTGCTCGCTCTACTGATATACCTCTATCTAACGGTGCGCCAATATAGCAAGCATTACCCTGAAGAACTCGGGTCTTCCGAGCGATCTTCTCGATCGTCAAGCTTGCATAGATTTCTTTCTTTTGCAGATGAAAAGGAAGAAGTCGTCAAAAGTCGATCCAAGCGTCGACGGATGCAGGAGGCTTCGGTTCGAAGCATGAATGAAGAAAATTCGACAGGCAGTTCAAGAAAACATGGCCATGATGATGGTTATGATATTAATGCATGA 2742 43.69 MRVICLLVLMLLFNGSSSIGDSKNVSMRPDVVDIGALFSFSSMIGRVGKIAVEAAVEDVNSDPSILGGTKLKLSLHDTNYSGFLGIIESLRFMETKTLAIIGPQNSVTAHVLSHIANELQVPLLSFSATDPTLSSLQFPFFIRTSQNDLYQMAAVADIVDYFQWRQVIAIFVDDDHGRNVPLKPDASRDEVTDALVKVALSESRILVVHTYETTGMVVLDVARSLGMTEPGYVWIATNWLSLLLDTNSPLPSSSMENIQGLVALRLYSPDSALKRSFVSRWTNLTNGKASSGPLGLSTYGLYAYDTVWMLAHAINAFLNEGGDLSFSKLSKLTGTDVGTLNFNSMSIFNGGKTLLHRILDVKFTGITGRVEFTPDRDIIRPAFEVINIIGTGERRIGYWSNYSGLSTVPPESLYSKPPNRTSSNQKLYDVVWPGQATQKPRGWAFPNSGRRLRIGVPRRVGYQEFVSQVEGTDMFRGYCVDVFTAAINLLPYAVPYKLIPFGDGLTNPSVTELVRLLTTGVFDAAIGDIAIITNRTRMADFTQPYIESGLVIVAPVKKLNSNAWAFLRPFTPKMWCITAVSFLVIGAVVWILEHRINDDFRGPPKQQIITILWFSFSTLFFSHRENTVSTLGRIVLLVWLFVVLIINSSYTASLTSILTVQQLSSPVKGIETLISNNDPIGYQQGSFARNYLIEELGIHESRLVPLVSTEHYVKALNDGPTNNGVAAIIDERAYVELFLSTRCEYSIVGQEFTKNGWGFAFQRDSPLAVDMSTAILRLSENGDLQRIHDKWLMKSACTSQASKFEVDRLQLGSFWGLFLISGLACLLALLIYLYLTVRQYSKHYPEELGSSERSSRSSSLHRFLSFADEKEEVVKSRSKRRRMQEASVRSMNEENSTGSSRKHGHDDGYDINA 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4100639 4105128 + Cp4.1LG10g10490.1 Cpe10g00717 476254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00717 913 CDD PBP1_GABAb_receptor_plant 33 409 IPR044440 -
Cpe10g00717 913 MobiDBLite consensus disorder prediction 869 888 - -
Cpe10g00717 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 905 - -
Cpe10g00717 913 CDD GluR_Plant 450 792 - -
Cpe10g00717 913 Gene3D - 147 405 - -
Cpe10g00717 913 PANTHER GLUTAMATE RECEPTOR 3.6 13 905 - -
Cpe10g00717 913 SMART GluR_14 453 794 IPR001320 GO:0015276|GO:0016020
Cpe10g00717 913 Gene3D - 710 761 - -
Cpe10g00717 913 MobiDBLite consensus disorder prediction 869 913 - -
Cpe10g00717 913 Pfam Ligand-gated ion channel 793 824 IPR001320 GO:0015276|GO:0016020
Cpe10g00717 913 Gene3D - 50 380 - -
Cpe10g00717 913 Gene3D - 563 689 - -
Cpe10g00717 913 Pfam Receptor family ligand binding region 50 389 IPR001828 -
Cpe10g00717 913 MobiDBLite consensus disorder prediction 896 913 - -
Cpe10g00717 913 PIRSF IGluLR_plant 1 911 IPR017103 -
Cpe10g00717 913 Pfam Bacterial extracellular solute-binding proteins, family 3 500 792 IPR001638 -
Cpe10g00717 913 Gene3D - 762 792 - -
Cpe10g00717 913 SUPERFAMILY Periplasmic binding protein-like II 430 795 - -
Cpe10g00717 913 SUPERFAMILY Periplasmic binding protein-like I 28 443 IPR028082 -
Cpe10g00717 913 Gene3D - 444 562 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00011 Cpe-Chr6:38883 Cpe10g00717 Cpe-Chr10:4100639 0 dispersed
Cpe10g00717 Cpe-Chr10:4100639 Cpe16g00445 Cpe-Chr16:5732335 0 dispersed
Cpe10g00717 Cpe-Chr10:4100639 Cpe19g00900 Cpe-Chr19:6550892 0 wgd
Cpe10g00717 Cpe-Chr10:4100639 Cpe02g00025 Cpe-Chr2:134377 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00717 K05387 - csv:101213408 1568.13