Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00749 ATGCGAGCGTCTCGGAATAGCCAGGCATTGTCTGGGATCCATGAGATGCATCACCAGTCTGTGCAAAAGATAGATCCCTACTATTTATCACATTTACATGTATTGGAAAACAATGTTTCTCCTGACGCAAGCAGCCAGGGAAACAGTGTTAACTTCTCTTCCTTTAAGGATCAGTTCTTTACTCTGGAATCATTTCCGGCTACCGCTGATCTGAGTGCCTGTAATTCCCCTTCTGCTGTAAGTGGTCTGTCTTCCAGGAGCCCCTTCTCACCTCAAGGTTCTCAATCATGCTCCTCCGATCAACCCCATTCCTTTGACAACACATGCGGATCACCACAAAGTGGATGCTCAGTGACTGATGATGATAACGAATTAAAGTACAAGCTGAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCTGATATTGGGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGCACATCAAGATGCTTCAGTAGCAAGGTGGAACTGGAATCAAGTGGCTGAAATGATTCCTAGACTAAATCTTCGGGATACACTCATCCATTGTGCCCAAGCAATTCATGATTCTGATCTAAATGTGGCAACCTTATTTATGGATGTTTTAGGGAAGATGGTTTCTGTCTCTGGTGATCCAGCCCAGAGGTTGGGCGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAACGATCTGGGAGTGCAATATACAAGGCCCTAAAATGCGAAGAACCAACAAGCTCTGAACTCATGTCCTACATGTCTGTTCTATTCCAAATCTGCCCGTACTTTAAATTTGCTTACACCTCTGCCAATGCTATCATTTGGGAGGCCATGGTAAATGAACCGATAATCCACATAATTGATTTCCAAATCGCACAGGGTAGTCAGTATATACCTCTCATCCATGATCTTGCTAATCGGCCTGGTGGACCCCCAGTTCTTCTACGCATCACAGGTGTGGATGATTCCCAATCATCTCATGCACGAGGAGGGGGACTTCAAATTGTGGGACAGAAGCTAGCTCAGCTGGCTCAATCAAAAGGAATTCCCTTCCAATTTCATGCTGCTGCAATGTCCGGTTGTGAGGTCGAACGTAGTAATCTTAGAATACGACCTGGAGAAGCGTTGGCCGTAAATTTTCCATACGTCTTGCACCACATGCCAGATGAGAGTGTGAGCACACAGAATCACCGCGATCGGCTTCTAAGGCTAGTCAAAAGCCTGTCACCGAAAGTAGTAACTATTGTTGAGCAGGAATCTAACACCAACACATCCCCCTTCCTTCTTCGTTTTCTAGAGACGCTGGATTATTATACTGCTATGTTTGAATCAATAGATGTAGCTCGTTCGAGAGACGACAAGCAGCGAATCAGAGCGGAGCAGCACTGCGTGGCCCGAGACATAGTGAACATGGTAGCTTGTGAGGGGTTTGAAAGGATAGAACGTCATGAACTACTTGGCAAGTGGAGGATGAGAATGAAGATGGCTGGTTTCACTTCATATCCACTGAGCTCCTCTGTAAGTGGAGCCGTCAAGAATTTGTTGAGGGATTTTAATGGGAACTATAGACTCCAAGAAGTGGATGGGGCTCTCTACCTTGGCTGGAAAAACAGAGCAATGGCAACCTCCTCTGCATGGAGATGA 1650 45.88 MRASRNSQALSGIHEMHHQSVQKIDPYYLSHLHVLENNVSPDASSQGNSVNFSSFKDQFFTLESFPATADLSACNSPSAVSGLSSRSPFSPQGSQSCSSDQPHSFDNTCGSPQSGCSVTDDDNELKYKLKELEISLLGPESDIGDSCYCSFRGGAHQDASVARWNWNQVAEMIPRLNLRDTLIHCAQAIHDSDLNVATLFMDVLGKMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPTSSELMSYMSVLFQICPYFKFAYTSANAIIWEAMVNEPIIHIIDFQIAQGSQYIPLIHDLANRPGGPPVLLRITGVDDSQSSHARGGGLQIVGQKLAQLAQSKGIPFQFHAAAMSGCEVERSNLRIRPGEALAVNFPYVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLLRFLETLDYYTAMFESIDVARSRDDKQRIRAEQHCVARDIVNMVACEGFERIERHELLGKWRMRMKMAGFTSYPLSSSVSGAVKNLLRDFNGNYRLQEVDGALYLGWKNRAMATSSAWR 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4266154 4267803 + Cp4.1LG10g10060.1 Cpe10g00749 476286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00749 549 Pfam GRAS domain family 178 549 IPR005202 -
Cpe10g00749 549 PANTHER SCARECROW-LIKE PROTEIN 13 18 548 IPR030005 -
Cpe10g00749 549 MobiDBLite consensus disorder prediction 84 117 - -
Cpe10g00749 549 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Cpe10g00749 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 548 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00749 Cpe-Chr10:4266154 Cpe14g00768 Cpe-Chr14:6042419 0 dispersed
Cpe10g00749 Cpe-Chr10:4266154 Cpe16g00391 Cpe-Chr16:5492187 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50146 PF03514 GRAS 3.50E-125 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00749 - - mcha:111005597 985.326