Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00776 ATGGACAAAGGATGGGGTCTAACCGTTCGTGATTCTGATCACTCAATTGGGTTCCTTTCACACAACCCATCGCCGCTTACTCTCAATTCCTTTCATACAATGTTTCGTGCTACAGATTTTCCGGTGAAACTTTCCCGGACTGACGACAACGATGCGCCTCCACCGCCGCCCGACGACAATCGCTTCGTCGTTAACGAGGTCGACTTTTTCTCCGATAACAAAAGGGTGGCTGATAATCAGGAGGATCAAGACGCAAAACCTTCCGCTAATATTCTCGCCACCGTTCTTGTCAATAAAAACGACAACGTTTCCACTGCTACCGGAACTGCCTTTGTCAATACTGGGTTGCATTTGTTAACTGCTAACACCGGAAGCGATCAATCCTCGACGGTGGATGATGGAGTTTCATCGGATGGTGATGATAAACGAGCCAAAAACGAGTTAGCGCAGCTTCAAATGGAGCTCCAGCGTATGAAAGCTGAGAATCACAAGCTTAGGGACATGCTAAGCCATGTGAGCAACAACTACAGTACCCTACAAATGCATTTCTTTACCTTATTGCAACAGAATCAGGCCTCCCAACCCGGTCATGAAGCAGAGATTGGGGAGAAGAAATCGAGGGAATTGAAACAAGAAGTGGGAAGGGCGGTGGTTCCGAGGCAATTTATGGATCTAGGACCGAGTGGGAACACCGCCGAAATGGATGAATTATCTAATTCATCATCGGATGAAAGAACTCGTTCTGGGTCTCCGTTGAACAACAACAACAACAACAACTCGGAATCCGCCTCCAAAAAGAGCAGTGCAAGAGATCATCTCGAAATCGCCGCCCCTTCCGAGCAGGGGAATTCTAATGCCAGAGATGCCAAACGATCCATCCCCAGAGAAGAAAGCTCTGAATCAGAGTCTCACGGTTGGGGGCCTAATAAAGCCCCTCGATTCAACTCTTCTACTAAACCCCTCGAGCAATCCACCGAAGCCACCATGAGAAAAGCCCGCGTCTCAGTCCGTGCTCGATCAGAAGCTCCTATGATTTCTGATGGGTGTCAATGGCGAAAATATGGGCAAAAAATGGCCAAAGGAAACCCATGTCCACGGGCTTATTATCGATGCACAATGGCTGTAGGTTGCCCTGTTCGCAAACAAGTGCAACGTTGCGCGGAAGACAGGACTATATTGATAACAACTTACGAAGGCAACCACAACCATCCACTTCCTCCCGCGGCGATGGCGATGGCGTCAACCACGACGGCGGCAGCTACCATGTTGTTATCAGGGTCCATGTCAAGTGCGGACCATAATCTAATGAACCCCAATTTATTGGCTCGAGCCATACTTCCATGTTCCTCAAGCATGGCTACAATTTCAGCCTCGGCTCCATTTCCAACCATCACGTTAGACCTCACTCAGACCCCAAACCCATTGCAATTCCAAAGACCCGCGGCAGCACCCTTCCACCTGCCATTCCCCGGCGGACAACCACCGTTACCCCCCGCCCAAGTTTTGGGGCAACCGTTGTACAATCAGTCAAAATTCTCAGGGCTACAGCTATCTCATGAGATGGGGGCCAATTCCCCTCATTTGGGTCACCCCCAAATTGCACAACCGGCGCCCACAACCCAGTCTGGAGGTGCTTCTTTTGCCGATACGTTGAGTGCCGCCACCGCCGCTATCACCGCTGATCCGAATTTCACCGCCGCTCTCGCAGCCGCTATCTCCTCCATCATCGGCGGAGCACATTCGAATACTAATAGCACCACCACCACCAATACCACAACAAACAACAACAACAACAACAACGGAGACAACAATAGCAAAATTAGCAGTTTCCCTGGAAATTGA 1842 49.95 MDKGWGLTVRDSDHSIGFLSHNPSPLTLNSFHTMFRATDFPVKLSRTDDNDAPPPPPDDNRFVVNEVDFFSDNKRVADNQEDQDAKPSANILATVLVNKNDNVSTATGTAFVNTGLHLLTANTGSDQSSTVDDGVSSDGDDKRAKNELAQLQMELQRMKAENHKLRDMLSHVSNNYSTLQMHFFTLLQQNQASQPGHEAEIGEKKSRELKQEVGRAVVPRQFMDLGPSGNTAEMDELSNSSSDERTRSGSPLNNNNNNNSESASKKSSARDHLEIAAPSEQGNSNARDAKRSIPREESSESESHGWGPNKAPRFNSSTKPLEQSTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTTAAATMLLSGSMSSADHNLMNPNLLARAILPCSSSMATISASAPFPTITLDLTQTPNPLQFQRPAAAPFHLPFPGGQPPLPPAQVLGQPLYNQSKFSGLQLSHEMGANSPHLGHPQIAQPAPTTQSGGASFADTLSAATAAITADPNFTAALAAAISSIIGGAHSNTNSTTTTNTTTNNNNNNNGDNNSKISSFPGN 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4413950 4416635 + Cp4.1LG10g09790.1 Cpe10g00776 476313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00776 613 MobiDBLite consensus disorder prediction 214 339 - -
Cpe10g00776 613 MobiDBLite consensus disorder prediction 578 613 - -
Cpe10g00776 613 Coils Coil 141 175 - -
Cpe10g00776 613 MobiDBLite consensus disorder prediction 232 264 - -
Cpe10g00776 613 MobiDBLite consensus disorder prediction 519 546 - -
Cpe10g00776 613 SUPERFAMILY WRKY DNA-binding domain 338 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe10g00776 613 Gene3D WRKY domain 330 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe10g00776 613 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 60 599 IPR044810 GO:0003700
Cpe10g00776 613 MobiDBLite consensus disorder prediction 310 330 - -
Cpe10g00776 613 Pfam WRKY DNA -binding domain 347 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00776 613 PANTHER WRKY TRANSCRIPTION FACTOR 31-RELATED 60 599 - -
Cpe10g00776 613 MobiDBLite consensus disorder prediction 289 303 - -
Cpe10g00776 613 SMART WRKY_cls 345 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00776 613 ProSiteProfiles WRKY domain profile. 340 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe10g00776 613 MobiDBLite consensus disorder prediction 121 142 - -
Cpe10g00776 613 CDD bZIP 142 170 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00776 Cpe19g00951 CCT
Cpe10g00776 Cpe19g00951 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00776 Cpe-Chr10:4413950 Cpe14g00304 Cpe-Chr14:1787695 3.33E-43 dispersed
Cpe10g00776 Cpe-Chr10:4413950 Cpe15g00738 Cpe-Chr15:7706728 6.90E-160 wgd
Cpe10g00776 Cpe-Chr10:4413950 Cpe19g00951 Cpe-Chr19:6777505 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50148 PF03106 WRKY 5.40E-24 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00776 - - mcha:111012275 758.829