Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00792 ATGTTCGATCCAGATATGTTCCATACACTACACCCTCACCATCATATGTTTGACATGGCGTTTAATACCTCCGAAAACGAGTTGGAACATGTGAGAGATGATGATTTTGAGTCCAAATCAGGACCTGAAATCACCTTCGAGCCGCCTTGTGAGAGTGAGCATCAACAACGCGCCAAGAAGAGACGTTACAATCGCCATACACACCTCCAAATCCAAGAAATGGAAGCCTCCTTCCAAGATTTGTTGATAGATACGACTGTTATTGATGATATGACACAGATGGAGCGAATGAGTGGATATGGCCTGAAATCCACGAAGTCTGTCCCTTCTTCGTACTTTCACCTGCCGTCCAATGCTCCACAGACGTCGGGTTTCGTGGGGGAAATGTATGGAGCATGCGACTTTCTCCGCTCAATTTCCCGACCTTCAGAAGCCGACAAGCCAATCATTGTAGAACTGGCGGTTTCCGGCATGGAGGAATTGAGCCGAATGGCTCAGGCCGGAGAACCGTTGTGGGTTCCGGCTGATACCAAGTCAAGTGAGGTGGTTCTTAACGAAGCAGAGTATTTGAGTTGTTTTGGGGGCAGAGTTGGCCCCAAACCCTTGGGCTTTAGAACCGAAGCTTCTCGAGTTTCGGCTATTGTGTTCATGAACCATATTAAGCTCGTGGATATTTTAATGGACGCTATCACTTGGGTGGAACATGTTGAGGCGGACGAAACTGGTGTCCCGACAATGTACAGACCGCTCTTTAATTCAGGCCTCGCTTTTGGGGCTAAACGATGGGTTGCTACTTTAGATAGGCAATCTGAACGGTTTGCCACATCAATCGCCACCTCCATATCCACCGGCGATCTACGCGTCATATCGAGTATTGAAGGGAGGAAGAGTATGCTGAAGCTAGCAGAGAGAATGGTGACGAGCTTTTGCGCTGGCGTTGGCGCGTCGAGTGTACACGCTTGGACGGCGTTACCAATCGCCGCTGGTGATGATGTTCGAGTTGTAACGAGGAAGAGCACCGACGAACCAGGGCGACCACCTGGTGTTGTGCTGAGCGCCGCCACTTCTTTTTGGATCCCTGTTCCACCTAAGGCTGTGTTTGATTTCCTTCGGAAAGAGAAATCTCGAAGCGAGTGGGATATTCTGTCGAATGGGGGCTTAGTCCAGGAAATGGCGCACATAGCCAACGGCCGCCACACCGGGAATTGTGTTTCCTTGCTCCGTGTCAATAGTGCAAATTCGAGCCAGAGCAATATGCTGATACTACAAGAAAGCTGCACCGACTCTACAGGATCCTACGTTATTTATGCTCCGGTGGACACTGTTGCAATGAACGTGGTGCTAAGCGGTTGTGATCCGGATTACGTGGCACTTCTACCGTCAGGATTCGCCATACTCCCTGACGGACCTGCCGGGGCCAACGGCGGGGAAATTCTGGAGCTGGGCTCCGGTGGGTCACTCATCACGGTGGCATTTCAAATCCTGGTTGATTCAGTTCCAACAGCTAGACTTTCAATTGGATCAGTGGCCACCGTGAATAGCTTGATTAAGTGCACGGTTGAGAGGATCAGAGCCGCTTGGGATATTCTGTCGAATGGGGGCTTAGTCCAGGAAATGGCGCACATAGCCAACGGCCGCCACACCGGGAATTGTGTTTCCTTGCTCCGTGTCAATAGTGCAAATTCGAGCCAGAGCAATATGCTGATACTACAAGAAAGCTGCACCGACTCTACAGGATCCTACGTTATTTATGCTCCGGTGGACACTGTTGCAATGAACGTGGTGCTAAGCGGTTGTGATCCGGATTACGTGGCACTTCTACCGTCAGGATTCGCCATACTCCCTGACGGACCTGCCGGGGCCAACGGCGGGGAAATTCTGGAGCTGGGCTCCGGTGGGTCACTCATCACGGTGGCATTTCAAATCCTGGTTGATTCAGTTCCAACAGCTAGACTTTCAATTGGATCAGTGGCCACCGTGAATAGCTTGATTAAGTGCACGGTTGAGAGGATCAGAGCCGCTGTGATGCGGGAAAATCCCTAA 2043 50.81 MFDPDMFHTLHPHHHMFDMAFNTSENELEHVRDDDFESKSGPEITFEPPCESEHQQRAKKRRYNRHTHLQIQEMEASFQDLLIDTTVIDDMTQMERMSGYGLKSTKSVPSSYFHLPSNAPQTSGFVGEMYGACDFLRSISRPSEADKPIIVELAVSGMEELSRMAQAGEPLWVPADTKSSEVVLNEAEYLSCFGGRVGPKPLGFRTEASRVSAIVFMNHIKLVDILMDAITWVEHVEADETGVPTMYRPLFNSGLAFGAKRWVATLDRQSERFATSIATSISTGDLRVISSIEGRKSMLKLAERMVTSFCAGVGASSVHAWTALPIAAGDDVRVVTRKSTDEPGRPPGVVLSAATSFWIPVPPKAVFDFLRKEKSRSEWDILSNGGLVQEMAHIANGRHTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILPDGPAGANGGEILELGSGGSLITVAFQILVDSVPTARLSIGSVATVNSLIKCTVERIRAAWDILSNGGLVQEMAHIANGRHTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILPDGPAGANGGEILELGSGGSLITVAFQILVDSVPTARLSIGSVATVNSLIKCTVERIRAAVMRENP 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4503487 4508402 - Cp4.1LG10g09590.1 Cpe10g00792 476329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 230 526 - -
Cpe10g00792 680 Pfam START domain 230 272 IPR002913 GO:0008289
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 524 677 - -
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 524 677 IPR042160 -
Cpe10g00792 680 SUPERFAMILY Bet v1-like 294 524 - -
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 120 228 - -
Cpe10g00792 680 SUPERFAMILY Bet v1-like 524 672 - -
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 24 80 - -
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 120 228 IPR042160 -
Cpe10g00792 680 ProSiteProfiles START domain profile. 143 236 IPR002913 GO:0008289
Cpe10g00792 680 MobiDBLite consensus disorder prediction 29 62 - -
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 230 526 IPR042160 -
Cpe10g00792 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 80 IPR042160 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00792 Cpe19g00972 CCT
Cpe10g00792 Cpe20g00379 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01091 Cpe-Chr2:10001766 Cpe10g00792 Cpe-Chr10:4503487 1.83E-50 dispersed
Cpe10g00792 Cpe-Chr10:4503487 Cpe16g00448 Cpe-Chr16:5744649 1.23E-66 dispersed
Cpe10g00792 Cpe-Chr10:4503487 Cpe15g00750 Cpe-Chr15:7784636 7.00E-72 wgd
Cpe10g00792 Cpe-Chr10:4503487 Cpe19g00972 Cpe-Chr19:6850520 7.10E-93 wgd
Cpe10g00792 Cpe-Chr10:4503487 Cpe02g00755 Cpe-Chr2:4827195 7.37E-27 wgd
Cpe10g00792 Cpe-Chr10:4503487 Cpe20g00379 Cpe-Chr20:2136801 2.24E-31 wgd
Cpe10g00792 Cpe-Chr10:4503487 Cpe05g01445 Cpe-Chr5:10078047 4.42E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00792 K09338 - csv:101209093 548.895