Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00802 ATGATTCATTTCCTCCCTCAAACACCGTCCTTGCCTTCAATTTTACTACTGATTTCAATCTCTGGACTAATAGTCCCTTGTTGTAGCCAACGCTATTTAAACTGCTCAGGAACCAACACGGCTCGCCCAAATCTGAATTCTGACATCAACTTCCTACTGAATTCCTTGACCTCTCGAGCTTCCTCTCACACTTTTTACACTGAGACCTATAATGGAATCCATGGCCTCTTTCTCTGCCGAGGGGATCTTCCTAATGAGGCCTGTCATACCTGCATCGAAGGAGCAAGTCAACAAATCAAAGTCACCTGCTCATCACAAACAAATGGTACCATAGGCTTTGATGAATGTATGTTGAGATACTCAGTTGTGAACTTCTTTGGGATCCTGGAGACAGTTCCAAGAATACTGTTATATAATAGTCTGAACCAATCTACTATTGAAGACCGTGATTTCATTGATCTTGCATTGGTGTCTAATTTAGTACAAGATGCTACAAATTCAAATATGATGTTCAAGGAAGGTGAGGTAAATGTGGGTGGTGTGGATCAGAGATTTGGACTAGCACAGTGTACAAGAGATATCATCAAGCGTGATTGTGAGGTCTGTTTGACAAATTTGGTGACTTTTGCAAAGGGATGTTGCTTAAGGCAAAGAGGGTGGCGAGTTTTAGCTCCCAATTGTAATTTAAGGGTTGAGGCCTTTCAGTTTTATGGGATACCAGGACCTCCACCCTTGTCTCTTGATGAAGAAGGAGGCAACAGAACAAGGATCATTGTCATCAGCATATCAACAGTTGCAGCAGCGGCAGTTCTGCTAGGAATGATTTATGCCTCATTTTTATGGAGAAACAAAAGGGATCCATTGAAGTGCAAACAACTCGACTGGCTCAAGCGCGAAAACATTCTCAATGGGATTGCAAGAGGAATTCTGTATCTCCATGAAGATTCTCGACTCAAAATCATTCATAGAGATTTGAAAGTGAGTAATGTACTGTTAGATGAGGAGATGAATCCAAAAATATCAGATTTTGGAACTGCTAGGATATTTGGAGGCAAGCAAATTGATGCCAGCACCAATAGAATAGTTGGAACATATGGGTATATGGCGCCAGAGTATGCTATGGAGGGAGTTTTCTCAGTTAAATCCGATGTATACAGTTTTGGAGTTCTAATCCTGGAGGTGATCAGTGGGAGAAAGAGCATTGGTTTTCTAAACATGGACAGAGCGCAGAACCTTCTGTCATATGCATGGGAGCTATGGAATGAAGGTAGAGCAGAAGAAATGATAGATGAGAACCTGGCTGGAGATTATCGTGAGAGTGAGGCCGTAAAATGGATCCAGATTGGCTTGCTGTGCGTGCAAGAAGATGCTAACACCAGACCCACCATGTCAATGGTTGTTCTAATGCTTGGAAGCCAGTCGGTTCACCTTCCTCAGCCCTCAAAACCTCCATTTCTTACAGGTCGAGGGTCTCTCAGTAGATATCAATATTCATCAACTGAAACAGGGACAGGGCTACTCACCACAGATCAGTCGTCTACTACTGCTTCTATCTAG 1557 42.65 MIHFLPQTPSLPSILLLISISGLIVPCCSQRYLNCSGTNTARPNLNSDINFLLNSLTSRASSHTFYTETYNGIHGLFLCRGDLPNEACHTCIEGASQQIKVTCSSQTNGTIGFDECMLRYSVVNFFGILETVPRILLYNSLNQSTIEDRDFIDLALVSNLVQDATNSNMMFKEGEVNVGGVDQRFGLAQCTRDIIKRDCEVCLTNLVTFAKGCCLRQRGWRVLAPNCNLRVEAFQFYGIPGPPPLSLDEEGGNRTRIIVISISTVAAAAVLLGMIYASFLWRNKRDPLKCKQLDWLKRENILNGIARGILYLHEDSRLKIIHRDLKVSNVLLDEEMNPKISDFGTARIFGGKQIDASTNRIVGTYGYMAPEYAMEGVFSVKSDVYSFGVLILEVISGRKSIGFLNMDRAQNLLSYAWELWNEGRAEEMIDENLAGDYRESEAVKWIQIGLLCVQEDANTRPTMSMVVLMLGSQSVHLPQPSKPPFLTGRGSLSRYQYSSTETGTGLLTTDQSSTTASI 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4550348 4553463 - Cp4.1LG10g09420.1 Cpe10g00802 476339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00802 518 Gene3D Transferase(Phosphotransferase) domain 1 278 478 - -
Cpe10g00802 518 SUPERFAMILY Protein kinase-like (PK-like) 288 470 IPR011009 -
Cpe10g00802 518 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 287 496 - -
Cpe10g00802 518 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 52 277 - -
Cpe10g00802 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Cpe10g00802 518 Gene3D - 27 125 IPR038408 -
Cpe10g00802 518 Gene3D - 136 236 IPR038408 -
Cpe10g00802 518 SMART serkin_6 254 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00802 518 Pfam Protein kinase domain 298 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00802 518 PANTHER PROTEIN KINASE DOMAIN 287 496 - -
Cpe10g00802 518 PANTHER PROTEIN KINASE DOMAIN 52 277 - -
Cpe10g00802 518 ProSiteProfiles Protein kinase domain profile. 167 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00802 518 Pfam Salt stress response/antifungal 35 121 IPR002902 -
Cpe10g00802 518 Pfam Salt stress response/antifungal 156 232 IPR002902 -
Cpe10g00802 518 ProSiteProfiles Gnk2-homologous domain profile. 131 236 IPR002902 -
Cpe10g00802 518 ProSiteProfiles Gnk2-homologous domain profile. 27 125 IPR002902 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00889 Cpe10g00802 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00889 Cpe-Chr9:8091664 Cpe10g00802 Cpe-Chr10:4550348 2.71E-110 dispersed
Cpe10g00802 Cpe-Chr10:4550348 Cpe20g00390 Cpe-Chr20:2193306 3.94E-95 dispersed
Cpe10g00801 Cpe-Chr10:4546673 Cpe10g00802 Cpe-Chr10:4550348 2.53E-91 tandem
Cpe10g00802 Cpe-Chr10:4550348 Cpe10g00803 Cpe-Chr10:4555017 4.17E-100 tandem
Cpe10g00802 Cpe-Chr10:4550348 Cpe20g00389 Cpe-Chr20:2183693 2.17E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62667 PF00069 Pkinase 1.60E-25 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00802 - - cmax:111477688 532.332