Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe10g00870 | ATGAATCCCCAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATCCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTACCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAATCTTCGCCAAGTTAATGATCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTCCCTGCCATCACCTTTGTAATGGCTTGGATCCTCAGGCTAGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCTAAATTGGTGGGAACAATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATAAAAGGCCCAATTCTGGAGCTATTCTGGGTGAAACAGAGAGCAGATCATGCACAACAAAGGAGCGATATCAGCCTTCAACACACAATCAAAGGTTCAATTATGATCACAATTGGGTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCAGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGCTGGGCACAGCGGAGGGCACTGTGTTGGCTTTGGTGATGGAAAGAGGAAACGCCGCCGTTTGGTCCATTGGTTGGGGAACCCAATTGCTCGCTGCCGTTTATAGTGGGATATTTTGTTCAGGACTTGCTTATTACATTCAAGGATTAGTGATGAAAGACAAAGGTCCTGTGTTTGTCACTGCCTTTAGCCCATTGAGTATGGTCATCGTCGCTATCATGAGCTCCTTCATTTTGGGCGAACGTCTTTACTTTGGCAGGATTGTTGGAGCTGGGGTGATAATTGTGGGACTGTACCTTGTTGTTTGGGGGAAAAATAAAGATGGGAATTCCTCAAATGAAGACTTGAAATTGCCCATCAAACAAACAACAGAAATGGAAGAAAGTTCATCATCAGTTCAAGAACTTAATTCTGTTGATTCAAACAATGAGCAAAAATCATGA | 1116 | 43.64 | MNPQVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPIFAKLMILSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKLVGTIATVGGAMIMTLIKGPILELFWVKQRADHAQQRSDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSIGWGTQLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRIVGAGVIIVGLYLVVWGKNKDGNSSNEDLKLPIKQTTEMEESSSSVQELNSVDSNNEQKS | 371 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 4902433 | 4905733 | - | Cp4.1LG10g08810.1 | Cpe10g00870 | 476407 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe10g00870 | 371 | PANTHER | WAT1-RELATED PROTEIN | 9 | 341 | - | - | |
| Cpe10g00870 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 156 | - | - | |
| Cpe10g00870 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 235 | 331 | - | - | |
| Cpe10g00870 | 371 | MobiDBLite | consensus disorder prediction | 347 | 371 | - | - | |
| Cpe10g00870 | 371 | Pfam | EamA-like transporter family | 187 | 326 | IPR000620 | GO:0016020|GO:0016021 | |
| Cpe10g00870 | 371 | Pfam | EamA-like transporter family | 23 | 135 | IPR000620 | GO:0016020|GO:0016021 | |
| Cpe10g00870 | 371 | PANTHER | WAT1-RELATED PROTEIN | 9 | 341 | IPR030184 | GO:0016021|GO:0022857 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g02117 | Cpe-Chr1:17901936 | Cpe10g00870 | Cpe-Chr10:4902433 | 3.92E-51 | dispersed | |
| Cpe02g00548 | Cpe-Chr2:3275187 | Cpe10g00870 | Cpe-Chr10:4902433 | 1.53E-108 | dispersed | |
| Cpe06g00635 | Cpe-Chr6:3930842 | Cpe10g00870 | Cpe-Chr10:4902433 | 6.62E-122 | dispersed | |
| Cpe08g00736 | Cpe-Chr8:5816819 | Cpe10g00870 | Cpe-Chr10:4902433 | 3.68E-33 | dispersed | |
| Cpe09g00479 | Cpe-Chr9:3157687 | Cpe10g00870 | Cpe-Chr10:4902433 | 5.79E-91 | dispersed | |
| Cpe12g00146 | Cpe-Chr12:939046 | Cpe10g00870 | Cpe-Chr10:4902433 | 7.15E-71 | dispersed | |
| Cpe17g00189 | Cpe-Chr17:1211986 | Cpe10g00870 | Cpe-Chr10:4902433 | 1.71E-88 | dispersed | |
| Cpe19g00545 | Cpe-Chr19:4614758 | Cpe10g00870 | Cpe-Chr10:4902433 | 5.15E-14 | dispersed | |
| Cpe20g00555 | Cpe-Chr20:3258930 | Cpe10g00870 | Cpe-Chr10:4902433 | 3.49E-52 | dispersed | |
| Cpe01g02280 | Cpe-Chr1:19291497 | Cpe10g00870 | Cpe-Chr10:4902433 | 1.03E-77 | wgd | |
| Cpe01g00192 | Cpe-Chr1:1083179 | Cpe10g00870 | Cpe-Chr10:4902433 | 1.02E-91 | wgd | |
| Cpe01g01103 | Cpe-Chr1:6513013 | Cpe10g00870 | Cpe-Chr10:4902433 | 6.54E-124 | wgd | |
| Cpe10g00870 | Cpe-Chr10:4902433 | Cpe13g00840 | Cpe-Chr13:7414496 | 4.63E-135 | wgd | |
| Cpe10g00870 | Cpe-Chr10:4902433 | Cpe19g00374 | Cpe-Chr19:3365005 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe10g00870 | - | - | csv:101217902 | 639.417 |